RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 KLHL14Q9P2G3 628 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 GJD2Q9UKL4 321 aa16.23■□□□□ 0.19
SCARF1-203ENST00000434376 DNAJC25-GNG10A0A024R161 153 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 PPP1R12AO14974 1030 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-203ENST00000434376 CDH16O75309 829 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 KRT7P08729 469 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SURF1Q15526 300 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 DGKDQ16760 1214 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 TLDC1Q6P9B6 456 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 CXCL17Q6UXB2 119 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SPNS2Q8IVW8 549 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 PDIK1LQ8N165 341 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 PPP1R12CQ9BZL4 782 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 STRIP2Q9ULQ0 834 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SRRM3A6NNA2 597 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-203ENST00000434376 UGT1A9O60656 530 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 MSH2P43246 934 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 COPS2P61201 443 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 ROR1Q01973 937 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SPATA21Q7Z572 469 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 CPT1BQ92523 772 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 EDEM1Q92611 657 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 MAML3Q96JK9 1138 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 UGT1A7Q9HAW7 530 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 UGT1A10Q9HAW8 530 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 UGT1A8Q9HAW9 530 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 ASNSD1Q9NWL6 643 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 A0A0G2JND7 137 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 ATP2A2P16615 1042 aaKnown RBP16.22■□□□□ 0.19
SCARF1-203ENST00000434376 ADRA1DP25100 572 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 KLRC2P26717 231 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 FOXN2P32314 431 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 HIC1Q14526 733 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 THEMIS2Q5TEJ8 643 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 RHBDF2Q6PJF5 856 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 RMDN2Q96LZ7 410 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SPATS2LQ9NUQ6 558 aaKnown RBP16.22■□□□□ 0.19
SCARF1-203ENST00000434376 UBP1Q9NZI7 540 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SLC12A4Q9UP95 1085 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 SNX10Q9Y5X0 201 aa16.22■□□□□ 0.19
SCARF1-203ENST00000434376 KCNK1O00180 336 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SPTLC1O15269 473 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 MMP3P08254 477 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SMIM10L2AP0DMW4 78 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SMIM10L2BP0DMW5 78 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SLC1A5Q15758 541 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 LVRNQ6Q4G3 990 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 GCOM2Q9BZD3 368 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-203ENST00000434376 GBA2Q9HCG7 927 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-203ENST00000434376 NPHS2Q9NP85 383 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 ETNK2Q9NVF9 386 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SCN1AP35498 2009 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 CFAP73A6NFT4 308 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 KBTBD13C9JR72 458 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 CAPN9O14815 690 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 LGR5O75473 907 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 TARSP26639 723 aaKnown RBP16.21■□□□□ 0.19
SCARF1-203ENST00000434376 CALRP27797 417 aaKnown RBP16.21■□□□□ 0.19
SCARF1-203ENST00000434376 MAN1A1P33908 653 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SLC25A11Q02978 314 aaKnown RBP16.21■□□□□ 0.19
SCARF1-203ENST00000434376 ITIH4Q14624 930 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 OLFML2BQ68BL8 750 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 PIGWQ7Z7B1 504 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 TLK2Q86UE8 772 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 VCPIP1Q96JH7 1222 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 LGMNQ99538 433 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 SNRNP25Q9BV90 132 aaKnown RBP16.21■□□□□ 0.19
SCARF1-203ENST00000434376 OSBPL1AQ9BXW6 950 aa16.21■□□□□ 0.19
SCARF1-203ENST00000434376 A6NJR5 290 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 GNL1P36915 607 aaPredicted RBP16.21■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF157P51786 506 aaPredicted RBP16.21■□□□□ 0.18
SCARF1-203ENST00000434376 PGGT1BP53609 377 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 ANKRD20A2Q5SQ80 823 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 MARCH8Q5T0T0 291 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 ANKRD20A1Q5TYW2 823 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 FITM2Q8N6M3 262 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 C12orf50Q8NA57 414 aaPredicted RBP16.21■□□□□ 0.18
SCARF1-203ENST00000434376 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.18
SCARF1-203ENST00000434376 FLRT1Q9NZU1 646 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 SLC17A7Q9P2U7 560 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 NME7Q9Y5B8 376 aa16.21■□□□□ 0.18
SCARF1-203ENST00000434376 PAPSS1O43252 624 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-203ENST00000434376 TRUB2O95900 331 aaKnown RBP16.2■□□□□ 0.18
SCARF1-203ENST00000434376 FGFR1P11362 822 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 WDR4P57081 412 aaKnown RBP16.2■□□□□ 0.18
SCARF1-203ENST00000434376 SOX4Q06945 474 aaPredicted RBP16.2■□□□□ 0.18
SCARF1-203ENST00000434376 ADIGQ0VDE8 80 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 AP1B1Q10567 949 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 ZNF484Q5JVG2 852 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 GNASQ5JWF2 1037 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 PAFAH2Q99487 392 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 SIK2Q9H0K1 926 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 GOLGA8TH3BQL2 631 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 IL18RAPO95256 599 aa16.2■□□□□ 0.18
SCARF1-203ENST00000434376 AP3M2P53677 418 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms