RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 MZF1P28698 734 aaPredicted RBP11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 MAGEA4P43358 317 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 POU4F1Q01851 419 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 GRIK5Q16478 980 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 USP41Q3LFD5 358 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 SUSD6Q92537 303 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 BRD8Q9H0E9 1235 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 ASAH2Q9NR71 780 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 BTBD19C9JJ37 291 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 LMNAP02545 664 aaKnown RBP11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 RRM1P23921 792 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 PEX19P40855 299 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 HPCAP84074 193 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 ADIGQ0VDE8 80 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 STX3Q13277 289 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 TATDN1Q6P1N9 297 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 TAGAPQ8N103 731 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
CCDC144CP-202ENST00000433419 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 ATP5C1P36542 298 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 HSPA9P38646 679 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 MAGEA9P43362 315 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SERPINB4P48594 390 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SCNN1BP51168 640 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 RAP1GDS1P52306 607 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 GUCY1A3Q02108 690 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 PTK7Q13308 1070 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TMEM119Q4V9L6 283 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 UBE2OQ9C0C9 1292 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 AKAP7Q9P0M2 348 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 A0A087X0T9 212 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 F8VZ95 297 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 IFRD1O00458 451 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 CYTH3O43739 400 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 MAFO75444 373 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 PROSCO94903 275 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 FAM228BP0C875 321 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 CSH1P0DML2 217 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 CSH2P0DML3 217 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 RPL9P32969 192 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TP53BP2Q13625 1128 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TPCN2Q8NHX9 752 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 EDEM1Q92611 657 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 VCPIP1Q96JH7 1222 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 ERP44Q9BS26 406 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 LRRC40Q9H9A6 602 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 VIPAS39Q9H9C1 493 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TBC1D13Q9NVG8 400 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 RAB23Q9ULC3 237 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 RNF103-CHMP3A0A140T963 221 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 OR1E1P30953 314 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 MLH1P40692 756 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 POLR2LP62875 67 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 ILF2Q12905 390 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 PDE1CQ14123 709 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 CLEC16AQ2KHT3 1053 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 AGAP9Q5VTM2 703 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 DDX42Q86XP3 938 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 LRRC43Q8N309 656 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 AGR3Q8TD06 166 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 ACSF2Q96CM8 615 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 MRPL46Q9H2W6 279 aaKnown RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SDR42E2A6NKP2 422 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 EML1O00423 815 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 IGSF6O95976 241 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 DGKZQ13574 1117 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SGSM3Q96HU1 749 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 GAS2L1Q99501 681 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 RBM22Q9NW64 420 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 SCOCQ9UIL1 159 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TBC1D3BA6NDS4 549 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 H0Y3Z8 333 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 GOLGA8RI6L899 631 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 EPB42P16452 691 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 COILP38432 576 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 PSEN1P49768 467 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 MYO1HQ8N1T3 1032 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 RIBC1Q8N443 379 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 OSCP1Q8WVF1 389 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 CAMKK2Q96RR4 588 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 FAM167BQ9BTA0 163 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 COPS7BQ9H9Q2 264 aaPredicted RBP11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 NT5MQ9NPB1 228 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 KIF17Q9P2E2 1029 aa11.22□□□□□ -0.61
CCDC144CP-202ENST00000433419 TRAV19A0A0A6YYK7 116 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms