RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NUP210Q8TEM1 1887 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P24-201ENST00000433260 MYO16Q9Y6X6 1858 aa6.1□□□□□ -1.43
HMGB3P24-201ENST00000433260 NCANO14594 1321 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRAV19A0A0A6YYK7 116 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 FAM170AA1A519 330 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TULP2O00295 520 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TNFRSF10BO14763 440 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 PMM2O15305 246 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TADA3O75528 432 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 RTN3O95197 1032 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 PRAMEF12O95522 483 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 CKMP06732 381 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 MBL2P11226 248 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 LCP1P13796 627 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 NPR3P17342 541 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 BRD2P25440 801 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 PON1P27169 355 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 AVPR2P30518 371 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SOX9P48436 509 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 RGS7P49802 495 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC5A3P53794 718 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 VCPP55072 806 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 MFAP3P55082 362 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TYRO3Q06418 890 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 PDE4CQ08493 712 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TCP11X2Q5H9J9 407 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 CT47A1Q5JQC4 288 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 MIIPQ5JXC2 388 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRIM68Q6AZZ1 485 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TRIM65Q6PJ69 517 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 LIAT1Q6ZQX7 453 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 GPRIN1Q7Z2K8 1008 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 PIGZQ86VD9 579 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SUGP1Q8IWZ8 645 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 FBXL6Q8N531 539 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TTC39CQ8N584 583 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 AOPEPQ8N6M6 819 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 CELF5Q8N6W0 485 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 UBR7Q8N806 425 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 RBBP8NLQ8NC74 664 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 BPIFB1Q8TDL5 484 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 CSGALNACT1Q8TDX6 532 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 NDRG1Q92597 394 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 IRF7Q92985 503 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 E2F7Q96AV8 911 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 KREMEN1Q96MU8 473 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLITRK1Q96PX8 696 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZSWIM1Q9BR11 485 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 NACA2Q9H009 215 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 LINC00597Q9H2U6 94 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 CCSER2Q9H7U1 834 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 CSNK1G1Q9HCP0 422 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TDP1Q9NUW8 608 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 THG1LQ9NWX6 298 aaKnown RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 SMPD4Q9NXE4 827 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 GTSE1Q9NYZ3 720 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 EHD2Q9NZN4 543 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 GMIPQ9P107 970 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 HESX1Q9UBX0 185 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 DNAJC12Q9UKB3 198 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 AJAP1Q9UKB5 411 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 TSPAN16Q9UKR8 245 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 MTF2Q9Y483 593 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 COL6A3P12111 3177 aa6.09□□□□□ -1.43
HMGB3P24-201ENST00000433260 A0A1W2PQH9 124 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 ZNF840PA6NDX5 716 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 FAM170BA6NMN3 283 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 HHLA1C9JL84 531 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 FOXN3O00409 490 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 CYP26A1O43174 497 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 THAP12O43422 761 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 LETM1O95202 739 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 TBX18O95935 607 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 PNMA6AP0CW24 399 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 IRF1P10914 325 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 DDX6P26196 483 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 EEF1GP26641 437 aaKnown RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 PPP3CCP48454 512 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 KLK7P49862 253 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 TKTL1P51854 596 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 KPNA1P52294 538 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 COPB1P53618 953 aaKnown RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 SLC8A3P57103 927 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 ZXDBP98169 803 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 GCNT1Q02742 428 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 TNK2Q07912 1038 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 UBXN2BQ14CS0 331 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 MLF2Q15773 248 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 EXOC3L4Q17RC7 722 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 KLHL40Q2TBA0 621 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 ARHGAP29Q52LW3 1261 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 HECTD3Q5T447 861 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 CDKAL1Q5VV42 579 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 ARHGAP17Q68EM7 881 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 CC2D1AQ6P1N0 951 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 TPRG1Q6ZUI0 275 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 BMP8AQ7Z5Y6 402 aa6.08□□□□□ -1.44
HMGB3P24-201ENST00000433260 TTC30AQ86WT1 665 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms