RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 TSHZ1Q6ZSZ6 1077 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 LRRN4CLQ8ND94 238 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 TSEN34Q9BSV6 310 aaKnown RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 DPP3Q9NY33 737 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 MAP10Q9P2G4 905 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CFAP99D6REC4 459 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 VPS26AO75436 327 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 GCLCP48506 637 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 MAPK7Q13164 816 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ORC2Q13416 577 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 SNX17Q15036 470 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 FOXR1Q6PIV2 292 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 DNAJC14Q6Y2X3 702 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ST13P5Q8NFI4 369 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 IGDCC4Q8TDY8 1250 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CAPSLQ8WWF8 208 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 TARS2Q9BW92 718 aaKnown RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CTNNAL1Q9UBT7 734 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 FLT1P17948 1338 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 CNOT3O75175 753 aaKnown RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 BCL10O95999 233 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ADSLP30566 484 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 RFC5P40937 340 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 SRP54P61011 504 aaKnown RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 DPP10Q8N608 796 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 COPS7BQ9H9Q2 264 aaPredicted RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 DDX20Q9UHI6 824 aaKnown RBP11.78□□□□□ -0.52
SEC16A-206ENST00000431893 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
SEC16A-206ENST00000431893 ATP7BP35670 1465 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 SLC37A4O43826 429 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 SPAG6O75602 509 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 DGAT1O75907 488 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 ATG7O95352 703 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.52
SEC16A-206ENST00000431893 CYP2B6P20813 491 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 PRKCQQ04759 706 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 STARD3Q14849 445 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 MTFR1Q15390 333 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 LLGL2Q6P1M3 1020 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 ZCCHC23Q6ZST2 131 aa11.77□□□□□ -0.52
SEC16A-206ENST00000431893 MGAT4DA6NG13 374 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 TRAPPC3O43617 180 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 SNUPNO95149 360 aaKnown RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 CALB2P22676 271 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 SLC1A6P48664 564 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 DDR2Q16832 855 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 RPRD1AQ96P16 312 aaPredicted RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 A0A1W2PQJ5 194 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 C2orf81A6NN90 581 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 A8MX80 341 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 PLA2G6O60733 806 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 EIF2S1P05198 315 aaKnown RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 FAM58BPP0C7Q3 252 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 FAM200BP0CF97 657 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 MACC1Q6ZN28 852 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 ZMYM5Q9UJ78 669 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 GOLGA8TH3BQL2 631 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 FOXN3O00409 490 aaPredicted RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 TAL1P17542 331 aaPredicted RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 ATP6V1C1P21283 382 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF543Q08ER8 600 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 TMED8Q6PL24 325 aaPredicted RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 SLC20A1Q8WUM9 679 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 KIFC1Q9BW19 673 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.535e-8■□□□□ 9.5
SEC16A-206ENST00000431893 ADGRA3Q8IWK6 1321 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 ASB14A6NK59 587 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 TALDO1P37837 337 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 CAMK2GQ13555 558 aaPredicted RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 CUL2Q13617 745 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 NRF1Q16656 503 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 UGT3A1Q6NUS8 523 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 SPPL2AQ8TCT8 520 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 PABPC3Q9H361 631 aaKnown RBP11.77□□□□□ -0.53
SEC16A-206ENST00000431893 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
SEC16A-206ENST00000431893 A0A087X0T9 212 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF839A8K0R7 811 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 INPP4BO15327 924 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 NDUFB10O96000 172 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 FAM228BP0C875 321 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ZNF284Q2VY69 593 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 TRAPPC11Q7Z392 1133 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 SGMS1Q86VZ5 419 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 EMC1Q8N766 993 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 C19orf60Q96EN9 201 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 ALDH1A2O94788 518 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 RGS2P41220 211 aa11.76□□□□□ -0.53
SEC16A-206ENST00000431893 MAPK9P45984 424 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms