RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 GPR174Q9BXC1 333 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 KIAA1522Q9P206 1035 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 PP2D1A8MPX8 630 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 LEFTY2O00292 366 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TSPAN3O60637 253 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 LETM1O95202 739 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 F13A1P00488 732 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 NCAM1P13591 858 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 NOP14P78316 857 aaKnown RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 MTAPQ13126 283 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 EIF4HQ15056 248 aaKnown RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM105Q8N8V8 129 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TRIML1Q8N9V2 468 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 B3GALNT2Q8NCR0 500 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 MYCBPAPQ8TBZ2 947 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 KCNV2Q8TDN2 545 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 SELENOOQ9BVL4 669 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 SIK2Q9H0K1 926 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 ABCC13Q9NSE7 274 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 SCML1Q9UN30 329 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TTLL3Q9Y4R7 772 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 LDOC1O95751 146 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 JMJD7P0C870 316 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 CYP2F1P24903 491 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 NLRP12P59046 1061 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 FKBP3Q00688 224 aaKnown RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 DSC1Q08554 894 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 SLC39A14Q15043 492 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 ACBD5Q5T8D3 534 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 FILIP1Q7Z7B0 1213 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 DEFB124Q8NES8 71 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 CXorf40AQ8TE69 158 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 PLD4Q96BZ4 506 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 ASB16Q96NS5 453 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 C2orf49Q9BVC5 232 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 MINDY3Q9H8M7 445 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 XPNPEP1Q9NQW7 623 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 KDM1AO60341 852 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 SERPINC1P01008 464 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 HLA-DRAP01903 254 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 ARL4AP40617 200 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 GCLMP48507 274 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 LMAN1P49257 510 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 GALK1P51570 392 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 STARD6P59095 220 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 BST2Q10589 180 aaKnown RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 PTK2BQ14289 1009 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM270Q6UE05 265 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 WDR5BQ86VZ2 330 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 LSMEM2Q8N112 164 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM35BQ8NCS4 154 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TMEM161BQ8NDZ6 487 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 GDAP1Q8TB36 358 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 TRIM44Q96DX7 344 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 ZFYVE19Q96K21 471 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.81□□□□□ -1.64
UBE4A-202ENST00000431736 USP20Q9Y2K6 914 aa4.81□□□□□ -1.64
UBE4A-202ENST00000431736 PDXKO00764 312 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PDGFBP01127 241 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PSMD8P48556 350 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PDE1BQ01064 536 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ZC2HC1CQ53FD0 456 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PTAR1Q7Z6K3 402 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TPCN2Q8NHX9 752 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HAS1Q92839 578 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HSPA12BQ96MM6 686 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SP110Q9HB58 689 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 FAM205CA6NFA0 338 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 RIOK3O14730 519 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 OAZ2O95190 189 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 VCLP18206 1134 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TNFAIP3P21580 790 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 LRPAP1P30533 357 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HOXD11P31277 338 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 GRK6P43250 576 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TKTL1P51854 596 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 UCNP55089 124 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 PAK1Q13153 545 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 NME3Q13232 169 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 NTRK3Q16288 839 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 COLEC12Q5KU26 742 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 DENND1CQ8IV53 801 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ERLEC1Q96DZ1 483 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ZCWPW1Q9H0M4 648 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 CYLDQ9NQC7 956 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 MARCH5Q9NX47 278 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 RRN3Q9NYV6 651 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ARHGAP28Q9P2N2 729 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 SLC30A4O14863 429 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ZBTB39O15060 712 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 TBL1XO60907 577 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 VDRP11473 427 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ATP4AP20648 1035 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 CD6P30203 668 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 HOXD12P35452 270 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 ABCG1P45844 678 aa4.8□□□□□ -1.64
UBE4A-202ENST00000431736 NSFP46459 744 aaKnown RBP4.8□□□□□ -1.64
UBE4A-202ENST00000431736 KRT81Q14533 505 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms