RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 FOXN3O00409 490 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 IPO5O00410 1097 aaKnown RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 FFAR2O15552 330 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 URI1O94763 535 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 TNFRSF6BO95407 300 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 NDST3O95803 873 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ONECUT2O95948 504 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 CHRM2P08172 466 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 DHRS4L1P0CG22 281 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 CKMT1AP12532 417 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 RARRES1P49788 294 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 HNRNPMP52272 730 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZNF134P52741 427 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ITGA8P53708 1063 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 LILRA4P59901 499 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 SIM1P81133 766 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 KRT17Q04695 432 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 PPFIA1Q13136 1202 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 MAPK7Q13164 816 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 CTBP1Q13363 440 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 BMPR2Q13873 1038 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 TXNRD1Q16881 649 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZACNQ401N2 412 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 PLAC9Q5JTB6 97 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZNF618Q5T7W0 954 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 RRAGBQ5VZM2 374 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 MZT2AQ6P582 158 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 DTX2Q86UW9 622 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 TXLNBQ8N3L3 684 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC15A4Q8N697 577 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ATP11CQ8NB49 1132 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 PPHLN1Q8NEY8 458 aaKnown RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 SCARB1Q8WTV0 552 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 STYXQ8WUJ0 223 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 TFAP2BQ92481 460 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 SKA1Q96BD8 255 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 ZC3H10Q96K80 434 aaKnown RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 MESP1Q9BRJ9 268 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 LRFN1Q9P244 771 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 SLC17A6Q9P2U8 582 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 RGS17Q9UGC6 210 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 TLK1Q9UKI8 766 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 GJD2Q9UKL4 321 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 SCAF8Q9UPN6 1271 aaKnown RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 MAN2B2Q9Y2E5 1009 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 CRYL1Q9Y2S2 319 aa3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 COL11A2P13942 1736 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P9-201ENST00000429856 TRIM43BA6NCK2 446 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 HMGB1P1B2RPK0 211 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 ADM5C9JUS6 153 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SLC16A3O15427 465 aaKnown RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 TTLL1O95922 423 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 CD4P01730 458 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 HSD3B1P14060 373 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 CNTFP26441 200 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 KLRC1P26715 233 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 PDE6CP51160 858 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 CACNA2D1P54289 1103 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SOX10P56693 466 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 ARHGAP40Q5TG30 622 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 VPS53Q5VIR6 699 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 RGS7BPQ6MZT1 257 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM180BQ6P0A1 224 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 PGBD2Q6P3X8 592 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 C1orf122Q6ZSJ8 110 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 MAATS1Q7Z4T9 603 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 PEG10Q86TG7 708 aaKnown RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SLC15A3Q8IY34 581 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 MPP5Q8N3R9 675 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 BOLLQ8N9W6 283 aaKnown RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SIMC1Q8NDZ2 872 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 OR1N1Q8NGS0 311 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 OR56A3Q8NH54 315 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 TRAPPC12Q8WVT3 735 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 ASB12Q8WXK4 309 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 MUL1Q969V5 352 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF566Q969W8 418 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SPSB4Q96A44 273 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 TRIM43Q96BQ3 446 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SNX22Q96L94 193 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 PPP1R9BQ96SB3 815 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SLC29A3Q9BZD2 475 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 MS4A7Q9GZW8 240 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 DACT1Q9NYF0 836 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 IFT80Q9P2H3 777 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 PDP2Q9P2J9 529 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SERTAD3Q9UJW9 196 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 ITGB1BP2Q9UKP3 347 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 NDRG4Q9ULP0 352 aaKnown RBP3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SH2B3Q9UQQ2 575 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBC1D30Q9Y2I9 924 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SCINQ9Y6U3 715 aa3.46□□□□□ -1.86
HMGB1P9-201ENST00000429856 SALL3Q9BXA9 1300 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 DYTNA2CJ06 578 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PYCARD-AS1I3L0S3 204 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 SYT5O00445 386 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PPM1DO15297 605 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms