RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 C12orf40Q86WS4 652 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 CRYBG2Q8N1P7 616 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 CCDC33Q8N5R6 958 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 ALLCQ8N6M5 410 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 TXNDC5Q8NBS9 432 aaKnown RBP15.77■□□□□ 0.12
MSH5-208ENST00000429846 OLIG1Q8TAK6 271 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 WHAMMQ8TF30 809 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 PAGE5Q96GU1 130 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 SPACA7Q96KW9 195 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 NACA2Q9H009 215 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 SDCBP2Q9H190 292 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 CCSER2Q9H7U1 834 aa15.77■□□□□ 0.12
MSH5-208ENST00000429846 MAP1BP46821 2468 aaKnown RBP15.77■□□□□ 0.11
MSH5-208ENST00000429846 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.11
MSH5-208ENST00000429846 TNRC6BQ9UPQ9 1833 aaKnown RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 SCAMP3O14828 347 aaKnown RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 CALUO43852 315 aaPredicted RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 KLF8O95600 359 aaPredicted RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 ASS1P00966 412 aaKnown RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 PFKFB1P16118 471 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 PMLP29590 882 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 TIE1P35590 1138 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 SLC6A11P48066 632 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 DLG4P78352 724 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 KDSRQ06136 332 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 TCEAL6Q6IPX3 200 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 TMEM92Q6UXU6 159 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 SV2AQ7L0J3 742 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 CYP2U1Q7Z449 544 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 ETFBKMTQ8IXQ9 262 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 PHTF2Q8N3S3 785 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 ZMIZ2Q8NF64 920 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 SLC2A14Q8TDB8 520 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 TCEAL3Q969E4 200 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 SMOQ99835 787 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 IMPG2Q9BZV3 1241 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 PNPLA8Q9NP80 782 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 TLR8Q9NR97 1041 aaKnown RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 GMIPQ9P107 970 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 CHORDC1Q9UHD1 332 aaPredicted RBP15.76■□□□□ 0.11
MSH5-208ENST00000429846 ANGPTL2Q9UKU9 493 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 TRAF3IP3Q9Y228 551 aa15.76■□□□□ 0.11
MSH5-208ENST00000429846 LNP1A1A4G5 178 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 SGK1O00141 431 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 KHNYNO15037 678 aaKnown RBP15.75■□□□□ 0.11
MSH5-208ENST00000429846 TLR5O60602 858 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 FAM200BP0CF97 657 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 CCDC130P13994 396 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 CMA1P23946 247 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 P2RY2P41231 377 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 PIK3CAP42336 1068 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 DPP6P42658 865 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 ASPAP45381 313 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 NDST1P52848 882 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 SHC2P98077 582 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 ENPEPQ07075 957 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 GOLGA8FQ08AF8 430 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 GOLGA8DPQ0D2H9 430 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 INCA1Q0VD86 236 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 MESP2Q0VG99 397 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 PKP1Q13835 747 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 BYSLQ13895 437 aaKnown RBP15.75■□□□□ 0.11
MSH5-208ENST00000429846 SPDYCQ5MJ68 293 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 DAB2IPQ5VWQ8 1189 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 CCDC47Q96A33 483 aaKnown RBP15.75■□□□□ 0.11
MSH5-208ENST00000429846 SPHK2Q9NRA0 654 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
MSH5-208ENST00000429846 DEC1Q9P2X7 70 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 HPSEQ9Y251 543 aa15.75■□□□□ 0.11
MSH5-208ENST00000429846 TBC1D3BA6NDS4 549 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 ANTXRLA6NF34 631 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 TULP3O75386 442 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 KCNK5O95279 499 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 HNRNPLP14866 589 aaKnown RBP eCLIP15.74■□□□□ 0.11
MSH5-208ENST00000429846 BCKDHBP21953 392 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 NFIL3Q16649 462 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 N4BP2L1Q5TBK1 243 aaPredicted RBP15.74■□□□□ 0.11
MSH5-208ENST00000429846 CEP135Q66GS9 1140 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 INTS8Q75QN2 995 aaKnown RBP15.74■□□□□ 0.11
MSH5-208ENST00000429846 LPCAT2Q7L5N7 544 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 TTC30AQ86WT1 665 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 SFTPA1Q8IWL2 248 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 BBS7Q8IWZ6 715 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 ZNF513Q8N8E2 541 aaPredicted RBP15.74■□□□□ 0.11
MSH5-208ENST00000429846 TERB1Q8NA31 727 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 DNAI2Q9GZS0 605 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 CYLDQ9NQC7 956 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 FAM49BQ9NUQ9 324 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 HMGXB4Q9UGU5 601 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 EVLQ9UI08 416 aaPredicted RBP15.74■□□□□ 0.11
MSH5-208ENST00000429846 INVSQ9Y283 1065 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 PCDHA5Q9Y5H7 936 aa15.74■□□□□ 0.11
MSH5-208ENST00000429846 A0A1B0GVL5 298 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 ADAM23O75077 832 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 BEST1O76090 585 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 RHOBTB3O94955 611 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 HLA-DRAP01903 254 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 NR2F2P24468 414 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 ATP5C1P36542 298 aaKnown RBP15.73■□□□□ 0.11
MSH5-208ENST00000429846 DHPSP49366 369 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms