RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GOLGA8OA6NCC3 632 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SPECC1L-ADORA2AF8WAN1 911 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 GOLGA8NF8WBI6 632 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 USP12O75317 370 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 ITGAVP06756 1048 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 KRT7P08729 469 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 CA9Q16790 459 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 GRAMD1BQ3KR37 738 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SLFN12LQ6IEE8 588 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SESTD1Q86VW0 696 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 COPS5Q92905 334 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 PEBP4Q96S96 227 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 DEFB129Q9H1M3 183 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 DHX35Q9H5Z1 703 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 PPM1HQ9ULR3 514 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 FIS1Q9Y3D6 152 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 LRRC42Q9Y546 428 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 HCRTO43612 131 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 ZC3H11AO75152 810 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH3-202ENST00000429102 ASS1P00966 412 aaKnown RBP12.97□□□□□ -0.33
CDH3-202ENST00000429102 NFICP08651 508 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CTC1Q2NKJ3 1217 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 PPM1JQ5JR12 505 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 NDRG1Q92597 394 aaKnown RBP12.97□□□□□ -0.33
CDH3-202ENST00000429102 MRIQ9BWK5 157 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CSH1P0DML2 217 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CSH2P0DML3 217 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 TCF7P36402 384 aaPredicted RBP12.97□□□□□ -0.33
CDH3-202ENST00000429102 CCDC15Q0P6D6 951 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 WASHC2DQ5SRD0 308 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CEP128Q6ZU80 1094 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 SCUBE1Q8IWY4 988 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CCNYQ8ND76 341 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 FGD4Q96M96 766 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 SMYD2Q9NRG4 433 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 DNAJC16Q9Y2G8 782 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 AFG3L2Q9Y4W6 797 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 CNTNAP2Q9UHC6 1331 aa12.97□□□□□ -0.33
CDH3-202ENST00000429102 KRT37O76014 449 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 DLDP09622 509 aaKnown RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 TCN1P20061 433 aaPredicted RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 TNS4Q8IZW8 715 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 TTC16Q8NEE8 873 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 PORCNQ9H237 461 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 DDX56Q9NY93 547 aaKnown RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 MTO1Q9Y2Z2 717 aaKnown RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 MFHAS1Q9Y4C4 1052 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 MAGEB2O15479 319 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 ITM2AO43736 263 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 STBD1O95210 358 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 PDGFRBP09619 1106 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 RANBP1P43487 201 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 MRPS35P82673 323 aaKnown RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 CES4AQ5XG92 561 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 CDCA2Q69YH5 1023 aaPredicted RBP12.96□□□□□ -0.33
CDH3-202ENST00000429102 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 APOPT1Q96IL0 206 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 ANKRD36BP1Q96IX9 119 aa12.96□□□□□ -0.33
CDH3-202ENST00000429102 LDHAP00338 332 aaKnown RBP12.96□□□□□ -0.34
CDH3-202ENST00000429102 PROCP04070 461 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 IRX1P78414 480 aaPredicted RBP12.96□□□□□ -0.34
CDH3-202ENST00000429102 GRIK3Q13003 919 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 CIAPIN1Q6FI81 312 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 PCGF5Q86SE9 256 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 RASSF3Q86WH2 238 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.34
CDH3-202ENST00000429102 APOL2Q9BQE5 337 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 TIPINQ9BVW5 301 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 NDE1Q9NXR1 346 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 DRG1Q9Y295 367 aaKnown RBP12.96□□□□□ -0.34
CDH3-202ENST00000429102 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.34
CDH3-202ENST00000429102 FARP1Q9Y4F1 1045 aaPredicted RBP12.96□□□□□ -0.34
CDH3-202ENST00000429102 MICAL2O94851 1124 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 OSBPP22059 807 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 ADORA2AP29274 412 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 RABGGTBP53611 331 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SNRPFP62306 86 aaKnown RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 BTKQ06187 659 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 MCL1Q07820 350 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 STX3Q13277 289 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 STXBP2Q15833 593 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 RABGAP1LQ5R372 815 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SDCBP2Q9H190 292 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 PNPOQ9NVS9 261 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SLC4A7Q9Y6M7 1214 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 E9PBE3 544 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SMAPO00193 183 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 KLHL41O60662 606 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms