RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CISHQ9NSE2 258 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 SH3BP1Q9Y3L3 701 aa19.44■□□□□ 0.7
PSPC1-202ENST00000427943 ANTXRLA6NF34 631 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 PSMA7O14818 248 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 TLR5O60602 858 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 GADD45BO75293 160 aaPredicted RBP19.43■□□□□ 0.7
PSPC1-202ENST00000427943 CD44P16070 742 aaKnown RBP19.43■□□□□ 0.7
PSPC1-202ENST00000427943 HOXA6P31267 233 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 STIM1Q13586 685 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 LAIR1Q6GTX8 287 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 C12orf40Q86WS4 652 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 RMDN1Q96DB5 314 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 HEXIM2Q96MH2 286 aaKnown RBP19.43■□□□□ 0.7
PSPC1-202ENST00000427943 OSER1Q9NX31 292 aa19.43■□□□□ 0.7
PSPC1-202ENST00000427943 CEP250Q9BV73 2442 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 E2F8A0AVK6 867 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 TBX18O95935 607 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 ADH5P11766 374 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 CNR2P34972 360 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 MESP2Q0VG99 397 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 LY6G5CQ5SRR4 150 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 KLHL10Q6JEL2 608 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 RHBDF2Q6PJF5 856 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 CEP68Q76N32 757 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-202ENST00000427943 SFTPA1Q8IWL2 248 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 KIAA1958Q8N8K9 716 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 SLC4A11Q8NBS3 891 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 GTPBP4Q9BZE4 634 aaKnown RBP19.42■□□□□ 0.7
PSPC1-202ENST00000427943 DNAI2Q9GZS0 605 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 NMUR1Q9HB89 426 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 PNPLA8Q9NP80 782 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 PARD6AQ9NPB6 346 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 TBC1D14Q9P2M4 693 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 ARMCX3Q9UH62 379 aaPredicted RBP19.42■□□□□ 0.7
PSPC1-202ENST00000427943 USP18Q9UMW8 372 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 SCML2Q9UQR0 700 aa19.42■□□□□ 0.7
PSPC1-202ENST00000427943 MYO18AQ92614 2054 aaKnown RBP19.42■□□□□ 0.7
PSPC1-202ENST00000427943 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 BIN1O00499 593 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 ADH1CP00326 375 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 SLC6A11P48066 632 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 RAD23BP54727 409 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 KDSRQ06136 332 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 SPEM2Q0P670 501 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 DMC1Q14565 340 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 BBS7Q8IWZ6 715 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 SLC35C1Q96A29 364 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 ACDQ96AP0 544 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 TMEM176AQ96HP8 235 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 FAXDC2Q96IV6 333 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 DUSP16Q9BY84 665 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 NUDT5Q9UKK9 219 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 COQ4Q9Y3A0 265 aa19.41■□□□□ 0.7
PSPC1-202ENST00000427943 SDK1Q7Z5N4 2213 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 K7EQS6 105 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 MDM4O15151 490 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 BMP6P22004 513 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 LRMPQ12912 555 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 CCDC40Q4G0X9 1142 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 C2orf27AQ580R0 203 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 SYT13Q7L8C5 426 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 DHTKD1Q96HY7 919 aaPredicted RBP19.4■□□□□ 0.7
PSPC1-202ENST00000427943 DUSP9Q99956 384 aaKnown RBP19.4■□□□□ 0.7
PSPC1-202ENST00000427943 CYLDQ9NQC7 956 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 CTNND2Q9UQB3 1225 aa19.4■□□□□ 0.7
PSPC1-202ENST00000427943 RPP40O75818 363 aaKnown RBP19.39■□□□□ 0.69
PSPC1-202ENST00000427943 CCDC192P0DO97 292 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 RARGP13631 454 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 TGM1P22735 817 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 ATP5C1P36542 298 aaKnown RBP19.39■□□□□ 0.69
PSPC1-202ENST00000427943 KIF11P52732 1056 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 CUL2Q13617 745 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 ELOA2Q8IYF1 753 aaPredicted RBP19.39■□□□□ 0.69
PSPC1-202ENST00000427943 TTC39CQ8N584 583 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 FAM160A2Q8N612 972 aaPredicted RBP19.39■□□□□ 0.69
PSPC1-202ENST00000427943 USP33Q8TEY7 942 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 GAB3Q8WWW8 586 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 NELFBQ8WX92 580 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 OTUB2Q96DC9 234 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 PNKPQ96T60 521 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 KLF16Q9BXK1 252 aaPredicted RBP19.39■□□□□ 0.69
PSPC1-202ENST00000427943 NAGPAQ9UK23 515 aa19.39■□□□□ 0.69
PSPC1-202ENST00000427943 KAT7O95251 611 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 APODP05090 189 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 RETP07949 1114 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 EIF2DP41214 584 aaKnown RBP19.38■□□□□ 0.69
PSPC1-202ENST00000427943 PPP1R2P41236 205 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 FMO5P49326 533 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 GAD2Q05329 585 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 MORC3Q14149 939 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 GOLGA7BQ2TAP0 167 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 ARHGAP17Q68EM7 881 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 TTI2Q6NXR4 508 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 THADAQ6YHU6 1953 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 CCDC186Q7Z3E2 898 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 SCD5Q86SK9 330 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 CCDC33Q8N5R6 958 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 CAMKK1Q8N5S9 505 aa19.38■□□□□ 0.69
PSPC1-202ENST00000427943 GPR161Q8N6U8 529 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms