RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MIEF1Q9NQG6 463 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TAGLN3Q9UI15 199 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 DBNLQ9UJU6 430 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 PNMA8BQ9ULN7 279 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 CDYLQ9Y232 598 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 SLC45A1Q9Y2W3 748 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 VSTM5A8MXK1 200 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 EXTL3O43909 919 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 GUCY1B2O75343 617 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 STAU1O95793 577 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 FGGP02679 453 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MRNIPQ6NTE8 343 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 CHADLQ6NUI6 762 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 FBXL19Q6PCT2 694 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RIN3Q8TB24 985 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 DTX3LQ8TDB6 740 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 JPH3Q8WXH2 748 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 CASP10Q92851 521 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TUBGCP3Q96CW5 907 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RNPC3Q96LT9 517 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 THTPAQ9BU02 230 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MKNK1Q9BUB5 465 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PDGFCQ9NRA1 345 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 FAM49BQ9NUQ9 324 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TMEM88BA6NKF7 163 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PDE2AO00408 941 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 ADCY6O43306 1168 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PFDN1O60925 122 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 GCATO75600 419 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PALMO75781 387 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MUTP22033 750 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 LIFRP42702 1097 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TUFMP49411 452 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 SERPINB9P50453 376 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 POLR2LP62875 67 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 STX5Q13190 355 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MFSD10Q14728 455 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ACAP2Q15057 778 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 NFE2Q16621 373 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 PROSER3Q2NL68 480 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 USP41Q3LFD5 358 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 XKR4Q5GH76 650 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ARHGAP17Q68EM7 881 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 DNAJB7Q7Z6W7 309 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 PLD3Q8IV08 490 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 HIPK4Q8NE63 616 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 BLOC1S5Q8TDH9 187 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ASAH2Q9NR71 780 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 POLE3Q9NRF9 147 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 INTS7Q9NVH2 962 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 BARHL2Q9NY43 387 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 HSPBP1Q9NZL4 362 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TUBGCP4Q9UGJ1 667 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 AAR2Q9Y312 384 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 ADGBQ8N7X0 1667 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 B2RBV5 119 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 CCDC188H7C350 402 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MYO1CO00159 1063 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 GYG2O15488 501 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RTN2O75298 545 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 FBXO21O94952 628 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ACOT2P49753 483 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RUNX1T1Q06455 604 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PPIGQ13427 754 aaKnown RBP eCLIP5.92□□□□□ -1.465e-8■□□□□ 9.7
HERC4-206ENST00000427635 FAM171A1Q5VUB5 890 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MARK2Q7KZI7 788 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 RASGRP2Q7LDG7 609 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ARHGEF26Q96DR7 871 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 CYTH2Q99418 400 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 OSBPL1AQ9BXW6 950 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TASP1Q9H6P5 420 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 KCND2Q9NZV8 630 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MARK1Q9P0L2 795 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ZFP69BQ9UJL9 534 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 AURKCQ9UQB9 309 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 CPSF1Q10570 1443 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 FTLP02792 175 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 AKR1B1P15121 316 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RPL17P18621 184 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 C4BPBP20851 252 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 DRAP1Q14919 205 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 PGS1Q32NB8 556 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 FAM46CQ5VWP2 391 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ILDR2Q71H61 639 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ELOA2Q8IYF1 753 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 PCYOX1LQ8NBM8 494 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ST13P5Q8NFI4 369 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 GPRASP2Q96D09 838 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TMEM39BQ9GZU3 492 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ANTXR1Q9H6X2 564 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PARVBQ9HBI1 364 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TRPC4Q9UBN4 977 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 KLHL20Q9Y2M5 609 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 TRPV2Q9Y5S1 764 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 URADA6NGE7 173 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 SLC25A12O75746 678 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 ATP5HO75947 161 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 CSF1RP07333 972 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 SP100P23497 879 aaPredicted RBP5.91□□□□□ -1.46
HERC4-206ENST00000427635 TLX1P31314 330 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms