RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MTSS1O43312 755 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 GAS2O43903 313 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 NUAK1O60285 661 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A9O60656 530 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 LPXNO60711 386 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SNX2O60749 519 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 DNAJA2O60884 412 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADAM23O75077 832 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 DGKIO75912 1065 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 KRT37O76014 449 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 NOL4O94818 638 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 OR6B1O95007 311 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ALX3O95076 343 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 BCL10O95999 233 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MT-ND3P03897 115 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 FYNP06241 537 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 IGKV5-2P06315 115 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ENO1P06733 434 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 LDHBP07195 334 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 DLDP09622 509 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 HSPA1AP0DMV8 641 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 HSPA1BP0DMV9 641 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 THRAP10827 490 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MYL2P10916 166 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UBL4AP11441 157 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PLS3P13797 630 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A6P19224 532 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ITIH1P19827 911 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A1P22309 533 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A4P22310 534 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 AMPD1P23109 780 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 DCKP27707 260 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MAP4P27816 1152 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PEX2P28328 305 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 EEF1DP29692 281 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 HOXC9P31274 260 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ATICP31939 592 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 IFNA8P32881 189 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A3P35503 534 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A5P35504 534 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SOX5P35711 763 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 GRIA2P42262 883 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 RAP1GAPP47736 663 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TNNI2P48788 182 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRIM2P49643 509 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ENTPD1P49961 510 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ITGA8P53708 1063 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TAGLNQ01995 201 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 BTKQ06187 659 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 C19orf57Q0VDD7 668 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 IFIT5Q13325 482 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PPIL2Q13356 520 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ATP1A4Q13733 1029 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SELPLGQ14242 412 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADGRE1Q14246 886 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 HERC3Q15034 1050 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SNX17Q15036 470 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 OXA1LQ15070 435 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRKD1Q15139 912 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 NFE2Q16621 373 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TXNRD1Q16881 649 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 LINC01559Q495D7 138 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 C5orf22Q49AR2 442 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 AASDHQ4L235 1098 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SFT2D3Q587I9 215 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CEP78Q5JTW2 689 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SLC10A5Q5PT55 438 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRPF38BQ5VTL8 546 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PLEKHA7Q6IQ23 1121 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZNF530Q6P9A1 599 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 XKRXQ6PP77 449 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TMC5Q6UXY8 1006 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MPRIPQ6WCQ1 1025 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TAS2R42Q7RTR8 314 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PRPF39Q86UA1 669 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CLVS1Q8IUQ0 354 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 IFNL3Q8IZI9 196 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 FBXW8Q8N3Y1 598 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 KIAA0895Q8NCT3 520 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SIMC1Q8NDZ2 872 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UHMK1Q8TAS1 419 aaKnown RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 CABLES1Q8TDN4 633 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ADAMTS16Q8TE57 1224 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SDCCAG3Q96C92 435 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 TXNDC15Q96J42 360 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 RILPQ96NA2 401 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 GCNAQ96QF7 691 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 SNX18Q96RF0 628 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZSCAN10Q96SZ4 725 aaPredicted RBP5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 COQ7Q99807 217 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 C17orf80Q9BSJ5 609 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 MKNK1Q9BUB5 465 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 PACSIN1Q9BY11 444 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 RHOBTB2Q9BYZ6 727 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 ZBTB3Q9H5J0 574 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 VPS37BQ9H9H4 285 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A7Q9HAW7 530 aa5.81□□□□□ -1.48
VTI1BP4-201ENST00000427516 UGT1A10Q9HAW8 530 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms