RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ATP2C2O75185 946 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 BANF1O75531 89 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 TGM2P21980 687 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 IL4RP24394 825 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 SCNN1AP37088 669 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 MLH1P40692 756 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 ARL4CP56559 192 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 GAD2Q05329 585 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 QPCTQ16769 361 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CCDC142Q17RM4 750 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CAPN12Q6ZSI9 719 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 ANKMY2Q8IV38 441 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CCDC13Q8IYE1 715 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CYP4X1Q8N118 509 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 PQLC3Q8N755 202 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 NAT8LQ8N9F0 302 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CHMP6Q96FZ7 201 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 HSFY1Q96LI6 401 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 UPF3AQ9H1J1 476 aaKnown RBP14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 FAM105AQ9NUU6 356 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 CACNG4Q9UBN1 327 aa14.6□□□□□ -0.07
APOBEC3D-202ENST00000427494 MYO1CO00159 1063 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 CREB1P16220 341 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 ACAT1P24752 427 aaKnown RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 ATXN1P54253 815 aaKnown RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 NRLP54845 237 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 BASP1P80723 227 aaKnown RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 TMED2Q15363 201 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 PPP6R3Q5H9R7 873 aaPredicted RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 WSCD1Q658N2 575 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 MICALCLQ6ZW33 695 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 SPATS2Q86XZ4 545 aaKnown RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 PLD5Q8N7P1 536 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 HNRNPABQ99729 332 aaKnown RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 PRMT1Q99873 361 aaKnown RBP14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZNF670Q9BS34 389 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 ADAM33Q9BZ11 813 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 KCNK9Q9NPC2 374 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 SLC38A7Q9NVC3 462 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 HEY1Q9Y5J3 304 aa14.59□□□□□ -0.07
APOBEC3D-202ENST00000427494 TCRBV7S3A2A0A539 114 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 TMEM120BA0PK00 339 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 CLDN5O00501 218 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 CA12O43570 354 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 TMEM63AO94886 807 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 PTPN1P18031 435 aaKnown RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 DRD4P21917 467 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 STIP1P31948 543 aaKnown RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 BCAR1P56945 870 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 SLC8A3P57103 927 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 FNBP1LQ5T0N5 605 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 SLC9A4Q6AI14 798 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 VSTM1Q6UX27 236 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 ARCQ7LC44 396 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 CPLX4Q7Z7G2 160 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 VSIG1Q86XK7 387 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 HACE1Q8IYU2 909 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 RIBC1Q8N443 379 aaPredicted RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 PCDH19Q8TAB3 1148 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 MGARPQ8TDB4 240 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 CENPIQ92674 756 aaPredicted RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 LPPQ93052 612 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 ZIC5Q96T25 663 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 GAD1Q99259 594 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 DUSP16Q9BY84 665 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 PHACTR1Q9C0D0 580 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 SENP6Q9GZR1 1112 aaPredicted RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 XPO7Q9UIA9 1087 aaKnown RBP14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 AP4E1Q9UPM8 1137 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 TLL2Q9Y6L7 1015 aa14.58□□□□□ -0.07
APOBEC3D-202ENST00000427494 C5orf60A6NFR6 353 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 POC1B-GALNT4F8VUJ3 575 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 SMAPO00193 183 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 CHRNA1P02708 482 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 BRAFP15056 766 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 IGFBP6P24592 240 aaPredicted RBP14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 IFNAR2P48551 515 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 CORO7P57737 925 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 ADIGQ0VDE8 80 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 MSS51Q4VC12 460 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 EFHC1Q5JVL4 640 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 PIGZQ86VD9 579 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 SRRM1Q8IYB3 904 aaKnown RBP14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 FUKQ8N0W3 1084 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 MED10Q9BTT4 135 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 DHX35Q9H5Z1 703 aaKnown RBP14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 EURLQ9NYK6 297 aa14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 DDX20Q9UHI6 824 aaKnown RBP14.58□□□□□ -0.08
APOBEC3D-202ENST00000427494 KCNN4O15554 427 aa14.57□□□□□ -0.08
APOBEC3D-202ENST00000427494 THP07101 528 aa14.57□□□□□ -0.08
APOBEC3D-202ENST00000427494 CYP2F1P24903 491 aa14.57□□□□□ -0.08
APOBEC3D-202ENST00000427494 GCAP28676 217 aa14.57□□□□□ -0.08
APOBEC3D-202ENST00000427494 L1CAMP32004 1257 aa14.57□□□□□ -0.08
APOBEC3D-202ENST00000427494 FLT3LGP49771 235 aa14.57□□□□□ -0.08
APOBEC3D-202ENST00000427494 TRIM32Q13049 653 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms