RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CYLDQ9NQC7 956 aa26.45■■□□□ 1.82
HERPUD2-205ENST00000427455 THG1LQ9NWX6 298 aaKnown RBP26.45■■□□□ 1.82
HERPUD2-205ENST00000427455 NAGPAQ9UK23 515 aa26.45■■□□□ 1.82
HERPUD2-205ENST00000427455 PCDHGC3Q9UN70 934 aa26.45■■□□□ 1.82
HERPUD2-205ENST00000427455 FAM86C2PA6NEL3 165 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 CHADO15335 359 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 GPR37L1O60883 481 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 RGS7P49802 495 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 ZNF445P59923 1031 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 FANCCQ00597 558 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 PLCB2Q00722 1185 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 SCD5Q86SK9 330 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 SH3RF2Q8TEC5 729 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 NAP1L5Q96NT1 182 aaPredicted RBP26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 CNGB3Q9NQW8 809 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 OSER1Q9NX31 292 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 CLIC5Q9NZA1 410 aa26.44■■□□□ 1.82
HERPUD2-205ENST00000427455 COL4A2P08572 1712 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 A0A1W2PQC6 194 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 MBL2P11226 248 aaPredicted RBP26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 KRT9P35527 623 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 MTF1Q14872 753 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 TMEM31Q5JXX7 168 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 SCML4Q8N228 414 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 RIN3Q8TB24 985 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 STK32AQ8WU08 396 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 NACA2Q9H009 215 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 TRPV5Q9NQA5 729 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 ARHGEF3Q9NR81 526 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 CPQQ9Y646 472 aa26.43■■□□□ 1.82
HERPUD2-205ENST00000427455 ARNTLO00327 626 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 RARGP13631 454 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 LCP1P13796 627 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 CYP11B1P15538 503 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 SOX5P35711 763 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 RPL34P49207 117 aaKnown RBP26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 NR1I3Q14994 352 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 TADA2BQ86TJ2 420 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 DDX42Q86XP3 938 aaKnown RBP eCLIP26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 SIX5Q8N196 739 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 ZNF276Q8N554 614 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 CDK5RAP1Q96SZ6 601 aaKnown RBP26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 CA14Q9ULX7 337 aa26.42■■□□□ 1.82
HERPUD2-205ENST00000427455 PRR33A8MZF0 331 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 LEFTY2O00292 366 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 FBXO21O94952 628 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 RALAP11233 206 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 STAT1P42224 750 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 ACADSBP45954 432 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 YWHAGP61981 247 aaKnown RBP eCLIP26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 CC2D1AQ6P1N0 951 aaPredicted RBP26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 KLHDC10Q6PID8 442 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 BHLHA9Q7RTU4 235 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 CACNA2D4Q7Z3S7 1137 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 PASD1Q8IV76 773 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 TTC16Q8NEE8 873 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 LHX5Q9H2C1 402 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 ST7Q9NRC1 585 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 SMPD4Q9NXE4 827 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 CEP83Q9Y592 693 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 TICRRQ7Z2Z1 1910 aa26.41■■□□□ 1.82
HERPUD2-205ENST00000427455 GABBR2O75899 941 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 GFPT2O94808 682 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 ATP5C1P36542 298 aaKnown RBP26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 UBASH3AP57075 661 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 DAOAP59103 153 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 ZXDBP98169 803 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 PDCLQ13371 301 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 BMP8AQ7Z5Y6 402 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 KIAA1958Q8N8K9 716 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 EPS8L1Q8TE68 723 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 IRGQQ8WZA9 623 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 ZFYVE19Q96K21 471 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 ZFRQ96KR1 1074 aaKnown RBP26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 SLC4A5Q9BY07 1137 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 CYTH4Q9UIA0 394 aa26.4■■□□□ 1.82
HERPUD2-205ENST00000427455 KRBA1A5PL33 1030 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 PIK3R2O00459 728 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 MLF2Q15773 248 aaPredicted RBP26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 SLC44A4Q53GD3 710 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 C10orf120Q5SQS8 335 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 CSGALNACT1Q8TDX6 532 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 NOX5Q96PH1 765 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 DNMT3LQ9UJW3 386 aa26.39■■□□□ 1.82
HERPUD2-205ENST00000427455 YJEFN3A6XGL0 299 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 E7ENQ6 273 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 TBX18O95935 607 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 PRKCQQ04759 706 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 PDGFRLQ15198 375 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 HFE2Q6ZVN8 426 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 NOP9Q86U38 636 aaKnown RBP26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 ZNF677Q86XU0 584 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 C1orf131Q8NDD1 294 aaKnown RBP26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 OSCP1Q8WVF1 389 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 DDX1Q92499 740 aaKnown RBP26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 NDRG1Q92597 394 aaKnown RBP26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 PBXIP1Q96AQ6 731 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 SHDQ96IW2 340 aa26.38■■□□□ 1.81
HERPUD2-205ENST00000427455 FAM83CQ9BQN1 747 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms