RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 OCRLQ01968 901 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 RNF180Q86T96 592 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 CCDC110Q8TBZ0 833 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 NRG4Q8WWG1 115 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 LZICQ8WZA0 190 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 NSL1Q96IY1 281 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 KLF6Q99612 283 aaPredicted RBP16.61■□□□□ 0.25
PKP4-205ENST00000426248 DNAI2Q9GZS0 605 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 TRABDQ9H4I3 376 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 SPATA7Q9P0W8 599 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 ARHGAP28Q9P2N2 729 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 GABRQQ9UN88 632 aa16.61■□□□□ 0.25
PKP4-205ENST00000426248 FTLP02792 175 aaPredicted RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 ADSSP30520 456 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 KRT17Q04695 432 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 TRIP10Q15642 601 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 LIN9Q5TKA1 542 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 PRUNE1Q86TP1 453 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 ARHGEF19Q8IW93 802 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 HSPBAP1Q96EW2 488 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 GRIP2Q9C0E4 1043 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 ARL2P36404 184 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 ASPHQ12797 758 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 DCTN2Q13561 401 aaKnown RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 MPP2Q14168 576 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 NCCRP1Q6ZVX7 275 aaPredicted RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 CCDC134Q9H6E4 229 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 UBAP1Q9NZ09 502 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 ZNF510Q9Y2H8 683 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 MTTPP55157 894 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 MTBPQ96DY7 904 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 URB1O60287 2271 aaKnown RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 GOLGA8SH3BPF8 625 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 LSAMPQ13449 338 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.6■□□□□ 0.25
PKP4-205ENST00000426248 ENDOVQ8N8Q3 282 aaKnown RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 FAM81BQ96LP2 452 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 HEXIM2Q96MH2 286 aaKnown RBP16.6■□□□□ 0.25
PKP4-205ENST00000426248 ECSITQ9BQ95 431 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 PRKAG3Q9UGI9 489 aa16.6■□□□□ 0.25
PKP4-205ENST00000426248 CALCAP01258 141 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 ITGB3P05106 788 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 ORC1Q13415 861 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 PPP2R5DQ14738 602 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 IYDQ6PHW0 289 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 ZDHHC18Q9NUE0 388 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 TREHO43280 583 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 YWHAEP62258 255 aaKnown RBP16.59■□□□□ 0.25
PKP4-205ENST00000426248 PPIDQ08752 370 aaKnown RBP16.59■□□□□ 0.25
PKP4-205ENST00000426248 C2CD6Q53TS8 623 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 PPP2R3CQ969Q6 453 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 ZNF212Q9UDV6 495 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 FOCADQ5VW36 1801 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 ATG7O95352 703 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 CLPTM1O96005 669 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 PENKP01210 267 aaPredicted RBP16.59■□□□□ 0.25
PKP4-205ENST00000426248 KITP10721 976 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 AMPD1P23109 780 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 AKAP5P24588 427 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 SERPINB8P50452 374 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 HPCAP84074 193 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 TMEM132DQ14C87 1099 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 GSTA3Q16772 222 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 ZPBP2Q6X784 338 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 SLC9A9Q8IVB4 645 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 FAM136AQ96C01 138 aa16.59■□□□□ 0.25
PKP4-205ENST00000426248 FBXO6Q9NRD1 293 aaPredicted RBP16.59■□□□□ 0.25
PKP4-205ENST00000426248 A0A0J9YVX5 310 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 CES2O00748 559 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 ATN1P54259 1190 aaPredicted RBP16.58■□□□□ 0.25
PKP4-205ENST00000426248 MYL6P60660 151 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 C16orf72Q14CZ0 275 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 TMEM259Q4ZIN3 620 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 ZDHHC24Q6UX98 284 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 RFFLQ8WZ73 363 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 AGPAT1Q99943 283 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.25
PKP4-205ENST00000426248 EBF3Q9H4W6 596 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 ARL8BQ9NVJ2 186 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 BARX2Q9UMQ3 279 aaPredicted RBP16.58■□□□□ 0.25
PKP4-205ENST00000426248 TMA7Q9Y2S6 64 aaKnown RBP16.58■□□□□ 0.25
PKP4-205ENST00000426248 SNX9Q9Y5X1 595 aa16.58■□□□□ 0.25
PKP4-205ENST00000426248 NRCAMQ92823 1304 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 OAS1P00973 400 aaKnown RBP16.58■□□□□ 0.24
PKP4-205ENST00000426248 GNA15P30679 374 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 B3GNT6Q6ZMB0 384 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 TMC2Q8TDI7 906 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 TTC17Q96AE7 1141 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 SLC7A6OSQ96CW6 309 aaPredicted RBP16.58■□□□□ 0.24
PKP4-205ENST00000426248 C11orf70Q9BRQ4 267 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 CYP4F11Q9HBI6 524 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 APPL1Q9UKG1 709 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 ZNF148Q9UQR1 794 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 MTM1Q13496 603 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms