RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 MAPRE1Q15691 268 aaKnown RBP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 CNGA2Q16280 664 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 SLC5A9Q2M3M2 681 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 FIGNQ5HY92 759 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 PPM1LQ5SGD2 360 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 LIN9Q5TKA1 542 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 C4orf50Q6ZRC1 276 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 CCDC149Q6ZUS6 474 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 CACNA2D4Q7Z3S7 1137 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 DNAAF5Q86Y56 855 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 PASD1Q8IV76 773 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 WDTC1Q8N5D0 677 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 ANKRD52Q8NB46 1076 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 CMASQ8NFW8 434 aaPredicted RBP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 SCAMP5Q8TAC9 235 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 HDAC7Q8WUI4 952 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 NDRG1Q92597 394 aaKnown RBP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 SECISBP2LQ93073 1101 aaKnown RBP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 GTPBP3Q969Y2 492 aaKnown RBP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 TCEAL4Q96EI5 215 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 SMARCD1Q96GM5 515 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 FUBP3Q96I24 572 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 C8orf48Q96LL4 319 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 FAM81BQ96LP2 452 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 PCDHB18PQ96TA0 734 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 SYT11Q9BT88 431 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 LRRC3Q9BY71 257 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 DUSP16Q9BY84 665 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 EDEM3Q9BZQ6 932 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 KDM4CQ9H3R0 1056 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 SFXN1Q9H9B4 322 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 GRPEL1Q9HAV7 217 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 CSNK1G1Q9HCP0 422 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 ZNF334Q9HCZ1 680 aaPredicted RBP6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 DZANK1Q9NVP4 752 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 ZDHHC7Q9NXF8 308 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 TJP2Q9UDY2 1190 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 KIAA1257Q9ULG3 409 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 MAFFQ9ULX9 164 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 MYO7AQ13402 2215 aa6.04□□□□□ -1.44
HERPUD2-204ENST00000426180 ATP8B3O60423 1300 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 NCK2O43639 380 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ADAM23O75077 832 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 MOSPD3O75425 235 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 LRG1P02750 347 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 TPM3P06753 285 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 RHOP08100 348 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 PLEKP08567 350 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 HNRNPA1P09651 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 FAM200BP0CF97 657 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 GJA1P17302 382 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 NPR3P17342 541 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 GPD2P43304 727 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ALDH1A3P47895 512 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SLC5A3P53794 718 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 EPHB3P54753 998 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 RPL10AP62906 217 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 BST2Q10589 180 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 IFRD2Q12894 506 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 PLD1Q13393 1074 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ASIC2Q16515 512 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SFMBT2Q5VUG0 894 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 HGSNATQ68CP4 663 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 PMF1Q6P1K2 205 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 WDR59Q6PJI9 974 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 VSTM1Q6UX27 236 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ZNF571Q7Z3V5 609 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 GRASPQ7Z6J2 395 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 DNAJB7Q7Z6W7 309 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 GPR149Q86SP6 731 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 TMEM150AQ86TG1 271 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 PIGZQ86VD9 579 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 TMC8Q8IU68 726 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SPC24Q8NBT2 197 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SMRP1Q8NCR6 262 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 C1orf131Q8NDD1 294 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ITFG1Q8TB96 612 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SLC35F5Q8WV83 523 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SMG7Q92540 1137 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ACDQ96AP0 544 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SPATA17Q96L03 361 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 DNAJC7Q99615 494 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 AGPAT1Q99943 283 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 SPOCK3Q9BQ16 436 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 CORO1BQ9BR76 489 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 NUP58Q9BVL2 599 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 ADAM7Q9H2U9 754 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 HAUS4Q9H6D7 363 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 DMAP1Q9NPF5 467 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 TAS2R14Q9NYV8 317 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 AIPL1Q9NZN9 384 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 HSFX1Q9UBD0 423 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 CD207Q9UJ71 328 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 MYO6Q9UM54 1294 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 MAGED2Q9UNF1 606 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 LUC7L2Q9Y383 392 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 DAAM1Q9Y4D1 1078 aa6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 USP15Q9Y4E8 981 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-204ENST00000426180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms