RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 OSGEPQ9NPF4 335 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 AVENQ9NQS1 362 aaPredicted RBP16.44■□□□□ 0.22
SHOX2-202ENST00000425436 LCMT1Q9UIC8 334 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 CD207Q9UJ71 328 aa16.44■□□□□ 0.22
SHOX2-202ENST00000425436 C2orf16Q68DN1 1984 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 UNGP13051 313 aaPredicted RBP16.43■□□□□ 0.22
SHOX2-202ENST00000425436 HOXB8P17481 243 aaPredicted RBP16.43■□□□□ 0.22
SHOX2-202ENST00000425436 GRIK1P39086 918 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 ALDH1A3P47895 512 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 TUFMP49411 452 aaKnown RBP16.43■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF132P52740 706 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 RASGEF1CQ8N431 466 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF707Q96C28 371 aaPredicted RBP16.43■□□□□ 0.22
SHOX2-202ENST00000425436 ARHGEF26Q96DR7 871 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 FUBP3Q96I24 572 aaKnown RBP eCLIP16.43■□□□□ 0.22
SHOX2-202ENST00000425436 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 PSMB7Q99436 277 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 DNAI2Q9GZS0 605 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 CARD9Q9H257 536 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 EPC1Q9H2F5 836 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 ADAM7Q9H2U9 754 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 PIDD1Q9HB75 910 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 TMEM30AQ9NV96 361 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 HCFC1R1Q9NWW0 138 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 ZDHHC7Q9NXF8 308 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 COG5Q9UP83 839 aa16.43■□□□□ 0.22
SHOX2-202ENST00000425436 UNC80Q8N2C7 3258 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 CCDC188H7C350 402 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 PGRMC1O00264 195 aaKnown RBP16.42■□□□□ 0.22
SHOX2-202ENST00000425436 BEST1O76090 585 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
SHOX2-202ENST00000425436 ATF6P18850 670 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 BRD2P25440 801 aaKnown RBP16.42■□□□□ 0.22
SHOX2-202ENST00000425436 GNA15P30679 374 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 NSFP46459 744 aaKnown RBP16.42■□□□□ 0.22
SHOX2-202ENST00000425436 HDXQ7Z353 690 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 FAM35AQ86V20 835 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 SMG7Q92540 1137 aaKnown RBP16.42■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF653Q96CK0 615 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 PNKPQ96T60 521 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 HNRNPABQ99729 332 aaKnown RBP16.42■□□□□ 0.22
SHOX2-202ENST00000425436 ZSWIM1Q9BR11 485 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 HSFX1Q9UBD0 423 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 ALG6Q9Y672 507 aa16.42■□□□□ 0.22
SHOX2-202ENST00000425436 F8VP50 259 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 CEP104O60308 925 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 AP1G2O75843 785 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 LSM8O95777 96 aaKnown RBP16.41■□□□□ 0.22
SHOX2-202ENST00000425436 PAEPP09466 180 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 HNRNPA1P09651 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
SHOX2-202ENST00000425436 VDRP11473 427 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 MAGEA11P43364 429 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 EPHB3P54753 998 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 NTHL1P78549 312 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 CENPCQ03188 943 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 C2orf54Q08AI8 447 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 CES5AQ6NT32 575 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 POTEHQ6S545 545 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
SHOX2-202ENST00000425436 GPR149Q86SP6 731 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 DNAAF5Q86Y56 855 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 SMRP1Q8NCR6 262 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.41■□□□□ 0.22
SHOX2-202ENST00000425436 KRT82Q9NSB4 513 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF446Q9NWS9 450 aa16.41■□□□□ 0.22
SHOX2-202ENST00000425436 GRXCR2A6NFK2 248 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 HOXA9P31269 272 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 SLC1A1P43005 524 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 MAP3K7CLP57077 242 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 VSNL1P62760 191 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 MTMR3Q13615 1198 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 BEND6Q5SZJ8 279 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 C8orf74Q6P047 294 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 VSTM1Q6UX27 236 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 RTL10Q7L3V2 364 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 DNAJB7Q7Z6W7 309 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 CMASQ8NFW8 434 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 UBA3Q8TBC4 463 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF564Q8TBZ8 553 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 SMARCD1Q96GM5 515 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 MS4A14Q96JA4 679 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 ZNF512Q96ME7 567 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 SMOQ99835 787 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 CORO1BQ9BR76 489 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 NUP85Q9BW27 656 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 MRPL47Q9HD33 250 aaKnown RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 DNMT3BQ9UBC3 853 aaKnown RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 TMEM59LQ9UK28 342 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 PACSIN2Q9UNF0 486 aaPredicted RBP16.4■□□□□ 0.22
SHOX2-202ENST00000425436 CCDC66A2RUB6 948 aa16.4■□□□□ 0.22
SHOX2-202ENST00000425436 MED7O43513 233 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms