RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF518BQ9C0D4 1074 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TMEM74BQ9NUR3 256 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DNAJC17Q9NVM6 304 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 FAM13BQ9NYF5 915 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF510Q9Y2H8 683 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CLIC2O15247 247 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 HYAL3O43820 417 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 AP1G2O75843 785 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 RPN1P04843 607 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZXDBP98169 803 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ARID5AQ03989 594 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TRIP6Q15654 476 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 LRSAM1Q6UWE0 723 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 HTR3DQ70Z44 454 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MINDY1Q8N5J2 469 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CCDC150Q8NCX0 1101 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ENGASEQ8NFI3 743 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CDK5RAP1Q96SZ6 601 aaKnown RBP12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 IMPG2Q9BZV3 1241 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SPAARA0A1B0GVQ0 90 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 NEDD8-MDP1E9PL57 170 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CLDN5O00501 218 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SCAMP3O14828 347 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SPTLC2O15270 562 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 STX6O43752 255 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TLR5O60602 858 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PPP6R2O75170 966 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KIF20AO95235 890 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CYBBP04839 570 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 RALAP11233 206 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ACADMP11310 421 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SYT1P21579 422 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 OXTRP30559 389 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CHKAP35790 457 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 WASP42768 502 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DGKGP49619 791 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PSEN1P49768 467 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SLC5A3P53794 718 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MYL6P60660 151 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SUZ12Q15022 739 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ACAP1Q15027 740 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PEAR1Q5VY43 1037 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 IL27RAQ6UWB1 636 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KIAA1324Q6UXG2 1013 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 UNC93AQ86WB7 457 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TMEM25Q86YD3 366 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 BBS7Q8IWZ6 715 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 NELFCDQ8IXH7 590 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DEFB119Q8N690 84 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 IPO4Q8TEX9 1081 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TAF4BQ92750 862 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GATA6Q92908 595 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DHX58Q96C10 678 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KCNK16Q96T55 309 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TRIM9Q9C026 710 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KBTBD4Q9NVX7 518 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TFIP11Q9UBB9 837 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MBD1Q9UIS9 605 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 EIF4E1BA6NMX2 242 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MEI4A8MW99 385 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ADAM23O75077 832 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TYRP14679 529 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GABRG2P18507 467 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 NCOA4Q13772 614 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KNOP1Q1ED39 458 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GAB4Q2WGN9 574 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TPGS1Q6ZTW0 290 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 UNC13DQ70J99 1090 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PIP4P1Q86T03 277 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 C12orf40Q86WS4 652 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ETFBKMTQ8IXQ9 262 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CEP57L1Q8IYX8 460 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CHCHD4Q8N4Q1 142 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SCAMP5Q8TAC9 235 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CCDC47Q96A33 483 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 C7orf25Q9BPX7 421 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms