RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 TLR8Q9NR97 1041 aaKnown RBP22.74■■□□□ 1.23
CDCP1-202ENST00000425231 OSER1Q9NX31 292 aa22.74■■□□□ 1.23
CDCP1-202ENST00000425231 SPTBN4Q9H254 2564 aa22.74■■□□□ 1.23
CDCP1-202ENST00000425231 ACO1P21399 889 aaKnown RBP22.74■■□□□ 1.23
CDCP1-202ENST00000425231 HEATR6Q6AI08 1181 aaKnown RBP22.74■■□□□ 1.23
CDCP1-202ENST00000425231 JAKMIP2Q96AA8 810 aa22.74■■□□□ 1.23
CDCP1-202ENST00000425231 CEP63Q96MT8 703 aa22.74■■□□□ 1.23
CDCP1-202ENST00000425231 DNAI2Q9GZS0 605 aa22.74■■□□□ 1.23
CDCP1-202ENST00000425231 METTL14Q9HCE5 456 aaKnown RBP22.74■■□□□ 1.23
CDCP1-202ENST00000425231 TBC1D14Q9P2M4 693 aa22.74■■□□□ 1.23
CDCP1-202ENST00000425231 MYO16Q9Y6X6 1858 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 MYOFQ9NZM1 2061 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 CYP26A1O43174 497 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 TLR5O60602 858 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 TBX18O95935 607 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 KIF11P52732 1056 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 FOXR2Q6PJQ5 311 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 KIAA2013Q8IYS2 634 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 WBP2Q969T9 261 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 NMUR1Q9HB89 426 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 CYLDQ9NQC7 956 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 POLR3BQ9NW08 1133 aaPredicted RBP22.73■■□□□ 1.23
CDCP1-202ENST00000425231 NCDNQ9UBB6 729 aa22.73■■□□□ 1.23
CDCP1-202ENST00000425231 CNR2P34972 360 aa22.72■■□□□ 1.23
CDCP1-202ENST00000425231 SRSF5Q13243 272 aaKnown RBP22.72■■□□□ 1.23
CDCP1-202ENST00000425231 CUL2Q13617 745 aa22.72■■□□□ 1.23
CDCP1-202ENST00000425231 KLHL10Q6JEL2 608 aa22.72■■□□□ 1.23
CDCP1-202ENST00000425231 WDR5BQ86VZ2 330 aa22.72■■□□□ 1.23
CDCP1-202ENST00000425231 RPLP0P6Q8NHW5 317 aa22.72■■□□□ 1.23
CDCP1-202ENST00000425231 USP3Q9Y6I4 520 aa22.72■■□□□ 1.23
CDCP1-202ENST00000425231 KIAA1549LQ6ZVL6 1849 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 K7EQS6 105 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 BIN1O00499 593 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 FMO5P49326 533 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 ARHGAP17Q68EM7 881 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 NELFBQ8WX92 580 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 OTUB2Q96DC9 234 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 KLF16Q9BXK1 252 aaPredicted RBP22.71■■□□□ 1.23
CDCP1-202ENST00000425231 SLC8A2Q9UPR5 921 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 SH3BP1Q9Y3L3 701 aa22.71■■□□□ 1.23
CDCP1-202ENST00000425231 ANTXRLA6NF34 631 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 PMM2O15305 246 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 GREM1O60565 184 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 ATP5C1P36542 298 aaKnown RBP22.7■■□□□ 1.22
CDCP1-202ENST00000425231 SLC6A11P48066 632 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 LY6G5CQ5SRR4 150 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 SYT13Q7L8C5 426 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 CCDC186Q7Z3E2 898 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 SCD5Q86SK9 330 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 BBS7Q8IWZ6 715 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 UBXN6Q9BZV1 441 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 NACA2Q9H009 215 aa22.7■■□□□ 1.22
CDCP1-202ENST00000425231 CCDC163A0A0D9SF12 145 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 A0A1W2PQH9 124 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 EIF2DP41214 584 aaKnown RBP22.69■■□□□ 1.22
CDCP1-202ENST00000425231 PXNP49023 591 aaPredicted RBP22.69■■□□□ 1.22
CDCP1-202ENST00000425231 MESP2Q0VG99 397 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 SIM2Q14190 667 aaPredicted RBP22.69■■□□□ 1.22
CDCP1-202ENST00000425231 LPAL2Q16609 132 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 CCDC40Q4G0X9 1142 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 C12orf40Q86WS4 652 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 CAMKK1Q8N5S9 505 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 UBR7Q8N806 425 aa22.69■■□□□ 1.22
CDCP1-202ENST00000425231 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.69■■□□□ 1.22
CDCP1-202ENST00000425231 BICDL2A1A5D9 508 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 ADH1CP00326 375 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 IRF1P10914 325 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 ADH5P11766 374 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 RARGP13631 454 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 TGM1P22735 817 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 LRMPQ12912 555 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 KLHDC10Q6PID8 442 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 PRR23BQ6ZRT6 265 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 HTR3DQ70Z44 454 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 ZNF276Q8N554 614 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 ANKRD52Q8NB46 1076 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 SECISBP2LQ93073 1101 aaKnown RBP22.68■■□□□ 1.22
CDCP1-202ENST00000425231 NUDT5Q9UKK9 219 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 RAB23Q9ULC3 237 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 CTNND2Q9UQB3 1225 aa22.68■■□□□ 1.22
CDCP1-202ENST00000425231 A0A0A0MRY4 1105 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 PSEN1P49768 467 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 UBE2HP62256 183 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 RAB41Q5JT25 222 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 LAIR1Q6GTX8 287 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 PIGZQ86VD9 579 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 TTC30AQ86WT1 665 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 SFTPA1Q8IWL2 248 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 CCDC26Q8TAB7 109 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 LMO3Q8TAP4 145 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 USP33Q8TEY7 942 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 PNKPQ96T60 521 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 CHMP5Q9NZZ3 219 aa22.67■■□□□ 1.22
CDCP1-202ENST00000425231 CHRM1P11229 460 aaPredicted RBP22.66■■□□□ 1.22
CDCP1-202ENST00000425231 TBXAS1P24557 533 aaPredicted RBP22.66■■□□□ 1.22
CDCP1-202ENST00000425231 ID4P47928 161 aa22.66■■□□□ 1.22
CDCP1-202ENST00000425231 STX17P56962 302 aa22.66■■□□□ 1.22
CDCP1-202ENST00000425231 GAD2Q05329 585 aa22.66■■□□□ 1.22
CDCP1-202ENST00000425231 DMC1Q14565 340 aa22.66■■□□□ 1.22
CDCP1-202ENST00000425231 TMEM25Q86YD3 366 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms