RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 PSAPL1Q6NUJ1 521 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 TMEM92Q6UXU6 159 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 SLC9A9Q8IVB4 645 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 SFTPA1Q8IWL2 248 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 ZFRQ96KR1 1074 aaKnown RBP17.1■□□□□ 0.33
COL18A1-205ENST00000423214 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
COL18A1-205ENST00000423214 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 SDCBP2Q9H190 292 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 FAM49BQ9NUQ9 324 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 COMMD8Q9NX08 183 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 CHORDC1Q9UHD1 332 aaPredicted RBP17.1■□□□□ 0.33
COL18A1-205ENST00000423214 FRMD4BQ9Y2L6 1034 aa17.1■□□□□ 0.33
COL18A1-205ENST00000423214 TCRBV21S2A2A0A5A6 115 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 ANTXRLA6NF34 631 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 SGK1O00141 431 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 TNFRSF10BO14763 440 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 TM4SF5O14894 197 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 KHNYNO15037 678 aaKnown RBP17.09■□□□□ 0.33
COL18A1-205ENST00000423214 MAP3K13O43283 966 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 ACTN4O43707 911 aaKnown RBP17.09■□□□□ 0.33
COL18A1-205ENST00000423214 KLRC4O43908 158 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 TLR5O60602 858 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 C4BPAP04003 597 aaKnown RBP17.09■□□□□ 0.33
COL18A1-205ENST00000423214 CLDN10P78369 228 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 MESP2Q0VG99 397 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 STK4Q13043 487 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 ANO4Q32M45 955 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 KMT5BQ4FZB7 885 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 SNX30Q5VWJ9 437 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 NUDT18Q6ZVK8 323 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 TRMT11Q7Z4G4 463 aaKnown RBP17.09■□□□□ 0.33
COL18A1-205ENST00000423214 BBS7Q8IWZ6 715 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 PGBD3Q8N328 593 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 SLC2A14Q8TDB8 520 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 TAF4BQ92750 862 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 TLR8Q9NR97 1041 aaKnown RBP17.09■□□□□ 0.33
COL18A1-205ENST00000423214 HMGXB4Q9UGU5 601 aa17.09■□□□□ 0.33
COL18A1-205ENST00000423214 CEP295Q9C0D2 2601 aa17.08■□□□□ 0.33
COL18A1-205ENST00000423214 TBC1D3BA6NDS4 549 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 C4orf47A7E2U8 309 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 PDXKO00764 312 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 HOXC11O43248 304 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 CALUO43852 315 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 KRT37O76014 449 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 KCNK5O95279 499 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 FAM200BP0CF97 657 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 ADORA2BP29275 332 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 PMLP29590 882 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 TNFRSF4P43489 277 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 KIR2DL1P43626 348 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 NOVA1P51513 510 aaKnown RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 NDST1P52848 882 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 MAP3K7CLP57077 242 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 DLG4P78352 724 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 ZACNQ401N2 412 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 PAQR9Q6ZVX9 377 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 LPCAT2Q7L5N7 544 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 UNC93AQ86WB7 457 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 NAT16Q8N8M0 369 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 TERB1Q8NA31 727 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 OLIG1Q8TAK6 271 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 TMC2Q8TDI7 906 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 PIGKQ92643 395 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 CCDC47Q96A33 483 aaKnown RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 JAKMIP2Q96AA8 810 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 PAGE5Q96GU1 130 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 SMOQ99835 787 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 ZDHHC4Q9NPG8 344 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 TMEM9BQ9NQ34 198 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 SPHK2Q9NRA0 654 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 DMAC2Q9NW81 257 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 DEC1Q9P2X7 70 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 USP25Q9UHP3 1055 aa17.08■□□□□ 0.32
COL18A1-205ENST00000423214 LSM7Q9UK45 103 aaKnown RBP17.08■□□□□ 0.32
COL18A1-205ENST00000423214 FAM92AA1XBS5 289 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 TULP3O75386 442 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 KIF20AO95235 890 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 MYL1P05976 194 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL18A1-205ENST00000423214 PFKFB1P16118 471 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 P2RY2P41231 377 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 BYSLQ13895 437 aaKnown RBP17.07■□□□□ 0.32
COL18A1-205ENST00000423214 EMC10Q5UCC4 262 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 SPOPLQ6IQ16 392 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 ARMCX6Q7L4S7 300 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 ETFBKMTQ8IXQ9 262 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
COL18A1-205ENST00000423214 RLN3Q8WXF3 142 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms