RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TAS2R14Q9NYV8 317 aa17.86■□□□□ 0.45
COL7A1-202ENST00000422991 TRPM5Q9NZQ8 1165 aa17.86■□□□□ 0.45
COL7A1-202ENST00000422991 ADAMTS1Q9UHI8 967 aa17.86■□□□□ 0.45
COL7A1-202ENST00000422991 HELZP42694 1942 aaKnown RBP17.86■□□□□ 0.45
COL7A1-202ENST00000422991 BDP1A6H8Y1 2624 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 A0A087X0T9 212 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 ZNF840PA6NDX5 716 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 FAM228BP0C875 321 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 GZMAP12544 262 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 GJA1P17302 382 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 PGFP49763 221 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 GSDMDP57764 484 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 SNX16P57768 344 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 CYP4F8P98187 520 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 PTP4A2Q12974 167 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 TEAD2Q15562 447 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 SMAD2Q15796 467 aaKnown RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 ASTE1Q2TB18 679 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 SNX30Q5VWJ9 437 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 PTCRAQ6ISU1 281 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 ACAD10Q6JQN1 1059 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 PPP1R2P3Q6NXS1 205 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 MMS22LQ6ZRQ5 1243 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 MON1BQ7L1V2 547 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 GET4Q7L5D6 327 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 SCD5Q86SK9 330 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 MON1AQ86VX9 555 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 SCUBE3Q8IX30 993 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 ING5Q8WYH8 240 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 NDRG1Q92597 394 aaKnown RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 C18orf8Q96DM3 657 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 C11orf70Q9BRQ4 267 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 NHEJ1Q9H9Q4 299 aaPredicted RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 TLR8Q9NR97 1041 aaKnown RBP17.85■□□□□ 0.45
COL7A1-202ENST00000422991 NENFQ9UMX5 172 aa17.85■□□□□ 0.45
COL7A1-202ENST00000422991 A0A1W2PQH9 124 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 YJEFN3A6XGL0 299 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 E7ENQ6 273 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 SART1O43290 800 aaKnown RBP17.84■□□□□ 0.45
COL7A1-202ENST00000422991 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
COL7A1-202ENST00000422991 C2CD6Q53TS8 623 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 STXBP5Q5T5C0 1151 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 OLFML1Q6UWY5 402 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 FAM183BPQ6ZVS7 135 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 XYLT1Q86Y38 959 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 NPAS3Q8IXF0 933 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 ARHGAP18Q8N392 663 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 MRPS31Q92665 395 aaKnown RBP17.84■□□□□ 0.45
COL7A1-202ENST00000422991 PIWIL1Q96J94 861 aaKnown RBP17.84■□□□□ 0.45
COL7A1-202ENST00000422991 NECAB3Q96P71 396 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-202ENST00000422991 DEF6Q9H4E7 631 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 NMUR1Q9HB89 426 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 OSER1Q9NX31 292 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 CHORDC1Q9UHD1 332 aaPredicted RBP17.84■□□□□ 0.45
COL7A1-202ENST00000422991 FAM50BQ9Y247 325 aa17.84■□□□□ 0.45
COL7A1-202ENST00000422991 TMCO5BA8MYB1 307 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 RTN2O75298 545 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 DDX6P26196 483 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL7A1-202ENST00000422991 PSEN1P49768 467 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 YWHAGP61981 247 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL7A1-202ENST00000422991 SLC18A3Q16572 532 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 ARHGAP15Q53QZ3 475 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 OR6B2Q6IFH4 312 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 POTEHQ6S545 545 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 ZDHHC17Q8IUH5 632 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 TMEM139Q8IV31 216 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 MCOLN2Q8IZK6 566 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 FGF13Q92913 245 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 PDLIM2Q96JY6 352 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 CCDC42Q96M95 316 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 MYADMQ96S97 322 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 ISCUQ9H1K1 167 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 CLIC5Q9NZA1 410 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 ADAM22Q9P0K1 906 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 NAGPAQ9UK23 515 aa17.83■□□□□ 0.44
COL7A1-202ENST00000422991 C2orf78A6NCI8 922 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 AKR1B10O60218 316 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 OAS1P00973 400 aaKnown RBP17.82■□□□□ 0.44
COL7A1-202ENST00000422991 LTFP02788 710 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 CALB1P05937 261 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 SCNN1AP37088 669 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 TUBP50607 506 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 GSCP56915 257 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-202ENST00000422991 SLC6A3Q01959 620 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 GFPT1Q06210 699 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-202ENST00000422991 GPR158Q5T848 1215 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 TXNDC8Q6A555 127 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 HFE2Q6ZVN8 426 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 TMTC1Q8IUR5 882 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 MCRS1Q96EZ8 462 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 PHF7Q9BWX1 381 aaPredicted RBP17.82■□□□□ 0.44
COL7A1-202ENST00000422991 TASP1Q9H6P5 420 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL7A1-202ENST00000422991 ASNSD1Q9NWL6 643 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL7A1-202ENST00000422991 GDE1Q9NZC3 331 aa17.82■□□□□ 0.44
COL7A1-202ENST00000422991 ZMYM5Q9UJ78 669 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms