RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
LINC00397-201ENST00000422074 FAM187BQ17R55 369 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 CACHD1Q5VU97 1274 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 DENND2CQ68D51 928 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 PLAG1Q6DJT9 500 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.88□□□□□ -1.63
LINC00397-201ENST00000422074 TSR2Q969E8 191 aaKnown RBP4.88□□□□□ -1.63
LINC00397-201ENST00000422074 ZC3H10Q96K80 434 aaKnown RBP4.88□□□□□ -1.63
LINC00397-201ENST00000422074 STRBPQ96SI9 672 aaKnown RBP4.88□□□□□ -1.63
LINC00397-201ENST00000422074 MMS19Q96T76 1030 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 SH2D3AQ9BRG2 576 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 TMEM79Q9BSE2 394 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 STK31Q9BXU1 1019 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 VPS51Q9UID3 782 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 MID2Q9UJV3 735 aa4.88□□□□□ -1.63
LINC00397-201ENST00000422074 AGPSO00116 658 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 CES2O00748 559 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 RGS10O43665 173 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 TMPRSS11DO60235 418 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 PIAS2O75928 621 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 TOP3BO95985 862 aaKnown RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 A1BGP04217 495 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 APEHP13798 732 aaKnown RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 ATF7P17544 494 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 TPH1P17752 444 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 PGDP52209 483 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 MZT2AQ6P582 158 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 C14orf80Q86SX3 495 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 SDR16C5Q8N3Y7 309 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 PNISRQ8TF01 805 aaKnown RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 IPCEF1Q8WWN9 437 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 PHKBQ93100 1093 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 KAZALD1Q96I82 304 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 ZBTB45Q96K62 511 aaPredicted RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 CCDC17Q96LX7 622 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 SELENOOQ9BVL4 669 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 DDX21Q9NR30 783 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 SNX15Q9NRS6 342 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 HDAC9Q9UKV0 1011 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 RIMKLBQ9ULI2 386 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 SCAF8Q9UPN6 1271 aaKnown RBP4.87□□□□□ -1.63
LINC00397-201ENST00000422074 COL15A1P39059 1388 aa4.87□□□□□ -1.63
LINC00397-201ENST00000422074 E5RJQ4 531 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 FOXN3O00409 490 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-201ENST00000422074 EXOC5O00471 708 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 MAP4K4O95819 1239 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-201ENST00000422074 MT-ND5P03915 603 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 HGFP14210 728 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 CD19P15391 556 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 CREB1P16220 341 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 IL1R2P27930 398 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 PTGER1P34995 402 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 CLCA4Q14CN2 919 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 LARS2Q15031 903 aaKnown RBP4.86□□□□□ -1.63
LINC00397-201ENST00000422074 SERPINA13PQ6UXR4 307 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 USP49Q70CQ1 688 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 UNC13DQ70J99 1090 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 SMCR8Q8TEV9 937 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-201ENST00000422074 SNX22Q96L94 193 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 BRIP1Q9BX63 1249 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 UNKQ9C0B0 810 aaKnown RBP4.86□□□□□ -1.63
LINC00397-201ENST00000422074 NUP62CLQ9H1M0 184 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 MGAT4CQ9UBM8 478 aa4.86□□□□□ -1.63
LINC00397-201ENST00000422074 NKX1-2Q9UD57 310 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-201ENST00000422074 TMEM232C9JQI7 657 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 F8W8V4 182 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 RAB27BO00194 218 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 FCHO1O14526 889 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 MCM5P33992 734 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 CARSP49589 748 aaKnown RBP4.85□□□□□ -1.63
LINC00397-201ENST00000422074 MTHFSP49914 203 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 COPAP53621 1224 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 CFHR3Q02985 330 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 TRIP6Q15654 476 aaKnown RBP4.85□□□□□ -1.63
LINC00397-201ENST00000422074 MANEALQ5VSG8 457 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 METTL25Q8N6Q8 603 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 FAM227BQ96M60 508 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 FAM118BQ9BPY3 351 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 ZCWPW1Q9H0M4 648 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 PDGFCQ9NRA1 345 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 TUBA8Q9NY65 449 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-201ENST00000422074 DNAJB11Q9UBS4 358 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 LPAR3Q9UBY5 353 aa4.85□□□□□ -1.63
LINC00397-201ENST00000422074 ATP5F1P24539 256 aaPredicted RBP4.84□□□□□ -1.63
LINC00397-201ENST00000422074 ETFDHQ16134 617 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 ST3GAL2Q16842 350 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 MIS18BP1Q6P0N0 1132 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 SLC2A7Q6PXP3 512 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 KRT28Q7Z3Y7 464 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 DGKHQ86XP1 1220 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 KRT73Q86Y46 540 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 LIX1LQ8IVB5 337 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 PIGOQ8TEQ8 1089 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 TTC17Q96AE7 1141 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 COQ8BQ96D53 544 aa4.84□□□□□ -1.63
LINC00397-201ENST00000422074 EDC3Q96F86 508 aaKnown RBP4.84□□□□□ -1.63
LINC00397-201ENST00000422074 METTL14Q9HCE5 456 aaKnown RBP4.84□□□□□ -1.63
LINC00397-201ENST00000422074 SEMA5BQ9P283 1151 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms