RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PYROXD1Q8WU10 500 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ALKBH8Q96BT7 664 aaKnown RBP15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ACSF2Q96CM8 615 aaPredicted RBP15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CABS1Q96KC9 395 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 C9orf72Q96LT7 481 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DUSP16Q9BY84 665 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PCDH18Q9HCL0 1135 aa15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.16■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GOLGA6L7A0A1B0GV03 622 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 HACD1B0YJ81 288 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GABRDO14764 452 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GPR182O15218 404 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SKIP12755 728 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CYBAP13498 195 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 BRAFP15056 766 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 NPR3P17342 541 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 AKAP5P24588 427 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RPL22P35268 128 aaKnown RBP15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MATKP42679 507 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 HDAC4P56524 1084 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GEMIN4P57678 1058 aaKnown RBP15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PDIA2Q13087 525 aaKnown RBP15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CCDC38Q502W7 563 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DARS2Q6PI48 645 aaKnown RBP15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 C6orf89Q6UWU4 347 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM228AQ86W67 206 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 OTUD6BQ8N6M0 293 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SMG8Q8ND04 991 aaKnown RBP15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GRAMD1AQ96CP6 724 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 HHIPL1Q96JK4 782 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SLC9A7Q96T83 725 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SNRNP25Q9BV90 132 aaKnown RBP15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ACSS3Q9H6R3 686 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 LRRC4CQ9HCJ2 640 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 NAALADL1Q9UQQ1 740 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 HES2Q9Y543 173 aa15.15■□□□□ 0.02
HLA-DPA1-242ENST00000419277 FAM47DPA6NHR8 397 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RASA4BC9J798 803 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PPEF2O14830 753 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RASA4O43374 803 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZBED1O96006 694 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CD48P09326 243 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 DRD4P21917 467 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RGS7P49802 495 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CCL14Q16627 93 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 C15orf59Q2T9L4 293 aaPredicted RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SLC25A52Q3SY17 297 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CYP4F22Q6NT55 531 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 TRNP1Q6NT89 227 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SERINC5Q86VE9 423 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PLD5Q8N7P1 536 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GLIS1Q8NBF1 620 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CCDC197Q8NCU1 140 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 KHSRPQ92945 711 aaKnown RBP eCLIP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RASSF4Q9H2L5 321 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RAD54BQ9Y620 910 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PTCH2Q9Y6C5 1203 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SQORQ9Y6N5 450 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CPP00450 1065 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 C6orf222P0C671 652 aaPredicted RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ARL4AP40617 200 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ATP11AP98196 1134 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CDK16Q00536 496 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CDO1Q16878 200 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SKIDA1Q1XH10 827 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 TRABD2AQ86V40 505 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SCUBE3Q8IX30 993 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CCDC13Q8IYE1 715 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GBP7Q8N8V2 638 aaPredicted RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MCUQ8NE86 351 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 UHMK1Q8TAS1 419 aaKnown RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MAML1Q92585 1016 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PIWIL1Q96J94 861 aaKnown RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SEC16BQ96JE7 1060 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 MAGEB18Q96M61 343 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 APOL6Q9BWW8 343 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 VPS37BQ9H9H4 285 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 FAM105AQ9NUU6 356 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 DDX20Q9UHI6 824 aaKnown RBP15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 AP4E1Q9UPM8 1137 aa15.14■□□□□ 0.01
HLA-DPA1-242ENST00000419277 H7C0C1 242 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 SEPT4O43236 478 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CA12O43570 354 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZNF623O75123 536 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 THP07101 528 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ZSCAN5DPP0CG00 497 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 RARBP10826 455 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 CST5P28325 142 aaPredicted RBP15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 PCSK1P29120 753 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GBP2P32456 591 aaPredicted RBP15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 STX2P32856 288 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 NOS2P35228 1153 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 ATP5OP48047 213 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 GDF10P55107 478 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 IL9RQ01113 521 aa15.13■□□□□ 0.01
HLA-DPA1-242ENST00000419277 HIC1Q14526 733 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms