RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 NMUR1Q9HB89 426 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 RBM12Q9NTZ6 932 aaKnown RBP21.41■■□□□ 1.02
GTF3A-202ENST00000419181 FBXO4Q9UKT5 387 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 PCDHB4Q9Y5E5 795 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 DMDP11532 3685 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 ZFHX2Q9C0A1 2572 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-202ENST00000419181 A0A1W2PQH9 124 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 PROB1E7EW31 1015 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 RNF225M0QZC1 329 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-202ENST00000419181 TRDMT1O14717 391 aaKnown RBP21.4■■□□□ 1.02
GTF3A-202ENST00000419181 NFATC1O95644 943 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 SP9P0CG40 484 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 ZNF132P52740 706 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 AMPD2Q01433 879 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 PDE4CQ08493 712 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 TMEM196Q5HYL7 178 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 CT47A1Q5JQC4 288 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-202ENST00000419181 SCD5Q86SK9 330 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 TFAP2BQ92481 460 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 PRMT8Q9NR22 394 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-202ENST00000419181 HESX1Q9UBX0 185 aa21.4■■□□□ 1.02
GTF3A-202ENST00000419181 E2F8A0AVK6 867 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 TULP2O00295 520 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 SLC9A3R1O14745 358 aaPredicted RBP21.39■■□□□ 1.01
GTF3A-202ENST00000419181 XPO1O14980 1071 aaKnown RBP21.39■■□□□ 1.01
GTF3A-202ENST00000419181 TBX18O95935 607 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 MTIF2P46199 727 aaKnown RBP21.39■■□□□ 1.01
GTF3A-202ENST00000419181 PSEN1P49768 467 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 BST2Q10589 180 aaKnown RBP21.39■■□□□ 1.01
GTF3A-202ENST00000419181 GAS6Q14393 721 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 ZNF528Q3MIS6 628 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 PKDCCQ504Y2 493 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 TRIM65Q6PJ69 517 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 FAM114A1Q8IWE2 563 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 RBBP8NLQ8NC74 664 aaPredicted RBP21.39■■□□□ 1.01
GTF3A-202ENST00000419181 ZSWIM1Q9BR11 485 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 CRACR2AQ9BSW2 395 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 NACA2Q9H009 215 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.39■■□□□ 1.01
GTF3A-202ENST00000419181 CNTN6Q9UQ52 1028 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 USP34Q70CQ2 3546 aa21.39■■□□□ 1.01
GTF3A-202ENST00000419181 GTPBP10A4D1E9 387 aaKnown RBP21.38■■□□□ 1.01
GTF3A-202ENST00000419181 SCAMP3O14828 347 aaKnown RBP21.38■■□□□ 1.01
GTF3A-202ENST00000419181 ATP5C1P36542 298 aaKnown RBP21.38■■□□□ 1.01
GTF3A-202ENST00000419181 NR1H3Q13133 447 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 NAIF1Q69YI7 327 aaPredicted RBP21.38■■□□□ 1.01
GTF3A-202ENST00000419181 FSTL4Q6MZW2 842 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 KLHDC10Q6PID8 442 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 LCLAT1Q6UWP7 414 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 Q6ZS52 159 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 ADGRG2Q8IZP9 1017 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 SYNPOQ8N3V7 929 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 ZNF276Q8N554 614 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 P2RY13Q9BPV8 354 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 CLIC5Q9NZA1 410 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 TBC1D14Q9P2M4 693 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 NAGPAQ9UK23 515 aa21.38■■□□□ 1.01
GTF3A-202ENST00000419181 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.38■■□□□ 1.01
GTF3A-202ENST00000419181 CYP17A1P05093 508 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 SETSIPP0DME0 302 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 RARGP13631 454 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 SLC9A1P19634 815 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 PLA2G4AP47712 749 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 TKTL1P51854 596 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 CSTF1Q05048 431 aaKnown RBP21.37■■□□□ 1.01
GTF3A-202ENST00000419181 GRSF1Q12849 480 aaKnown RBP eCLIP21.37■■□□□ 1.01
GTF3A-202ENST00000419181 CNGA2Q16280 664 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 MAN2A1Q16706 1144 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 GAB4Q2WGN9 574 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 GBP6Q6ZN66 633 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 SPEM1Q8N4L4 309 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 UBA3Q8TBC4 463 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 NKD2Q969F2 451 aaPredicted RBP21.37■■□□□ 1.01
GTF3A-202ENST00000419181 KLF16Q9BXK1 252 aaPredicted RBP21.37■■□□□ 1.01
GTF3A-202ENST00000419181 FBRSL1Q9HCM7 1045 aaKnown RBP21.37■■□□□ 1.01
GTF3A-202ENST00000419181 UBE2TQ9NPD8 197 aaPredicted RBP21.37■■□□□ 1.01
GTF3A-202ENST00000419181 SH3BP1Q9Y3L3 701 aa21.37■■□□□ 1.01
GTF3A-202ENST00000419181 GREM1O60565 184 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 MBD3O95983 291 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 BRD2P25440 801 aaKnown RBP21.36■■□□□ 1.01
GTF3A-202ENST00000419181 GALK1P51570 392 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 STILQ15468 1287 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 EXOC3L4Q17RC7 722 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 PM20D1Q6GTS8 502 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 ENOSF1Q7L5Y1 443 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 WBP2Q969T9 261 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 EXOC4Q96A65 974 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 OTUB2Q96DC9 234 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 NUDT5Q9UKK9 219 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 MYOFQ9NZM1 2061 aa21.36■■□□□ 1.01
GTF3A-202ENST00000419181 ZBED1O96006 694 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 CALCAP01258 141 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 TDGF1P13385 188 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 DRD1P21728 446 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 CCR3P51677 355 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 DHCR24Q15392 516 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 HSP90AA4PQ58FG1 418 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 MIIPQ5JXC2 388 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 C10orf120Q5SQS8 335 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 GJB7Q6PEY0 223 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms