RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ANKRD52Q8NB46 1076 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 NT5C1BQ96P26 610 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 USP3Q9Y6I4 520 aa17.37■□□□□ 0.37
LINC00404-201ENST00000418660 CHURC1-FNTBB4DL54 471 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 K7ESF4 209 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 SCAMP3O14828 347 aaKnown RBP17.36■□□□□ 0.37
LINC00404-201ENST00000418660 CYP26A1O43174 497 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 CYP17A1P05093 508 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 ATP5C1P36542 298 aaKnown RBP17.36■□□□□ 0.37
LINC00404-201ENST00000418660 PSEN1P49768 467 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 SLC8A3P57103 927 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 DHCR24Q15392 516 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 SGO2Q562F6 1265 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 UBR7Q8N806 425 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 LMO3Q8TAP4 145 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 OTUB2Q96DC9 234 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 EPC1Q9H2F5 836 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 C2orf42Q9NWW7 574 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 OSER1Q9NX31 292 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 RWDD2AQ9UIY3 292 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 KIAA1257Q9ULG3 409 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 SH3BP1Q9Y3L3 701 aa17.36■□□□□ 0.37
LINC00404-201ENST00000418660 A0A1W2PQH9 124 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 RNF40O75150 1001 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 TBX18O95935 607 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 HOXA6P31267 233 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 OPRD1P41143 372 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 KCNH2Q12809 1159 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 GAB4Q2WGN9 574 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 KLHDC10Q6PID8 442 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 RHBDF2Q6PJF5 856 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 PIGZQ86VD9 579 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 ZNF276Q8N554 614 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 EHBP1Q8NDI1 1231 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 EZH1Q92800 747 aaPredicted RBP17.35■□□□□ 0.37
LINC00404-201ENST00000418660 KLF16Q9BXK1 252 aaPredicted RBP17.35■□□□□ 0.37
LINC00404-201ENST00000418660 NMUR1Q9HB89 426 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00404-201ENST00000418660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00404-201ENST00000418660 MYO15AQ9UKN7 3530 aa17.35■□□□□ 0.37
LINC00404-201ENST00000418660 ADH1CP00326 375 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 AFPP02771 609 aaKnown RBP17.34■□□□□ 0.37
LINC00404-201ENST00000418660 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 VDRP11473 427 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 RARGP13631 454 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 FNTBP49356 437 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 DMWDQ09019 674 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 GOLGA7BQ2TAP0 167 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 RAB41Q5JT25 222 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 HTR3DQ70Z44 454 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 SCD5Q86SK9 330 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 LONP2Q86WA8 852 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 TTC30AQ86WT1 665 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 PPM1KQ8N3J5 372 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 CCDC26Q8TAB7 109 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 RUBCNQ92622 972 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 CLSTN2Q9H4D0 955 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 CLIC5Q9NZA1 410 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 HESX1Q9UBX0 185 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 DNMT3LQ9UJW3 386 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 NAGPAQ9UK23 515 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 TSPAN16Q9UKR8 245 aa17.34■□□□□ 0.37
LINC00404-201ENST00000418660 USP34Q70CQ2 3546 aa17.33■□□□□ 0.37
LINC00404-201ENST00000418660 PAEPP09466 180 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 IRF1P10914 325 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 RALAP11233 206 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 ADH5P11766 374 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 CD19P15391 556 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 CNR2P34972 360 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 EIF2DP41214 584 aaKnown RBP17.33■□□□□ 0.36
LINC00404-201ENST00000418660 PLA2G4AP47712 749 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 GOLGA8FQ08AF8 430 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 GOLGA8DPQ0D2H9 430 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 CLEC17AQ6ZS10 378 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 BBS7Q8IWZ6 715 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 ARHGAP18Q8N392 663 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 MLKLQ8NB16 471 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 WBP2Q969T9 261 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 CDK5RAP1Q96SZ6 601 aaKnown RBP17.33■□□□□ 0.36
LINC00404-201ENST00000418660 SMG5Q9UPR3 1016 aaKnown RBP17.33■□□□□ 0.36
LINC00404-201ENST00000418660 SLC8A2Q9UPR5 921 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 PCDHB4Q9Y5E5 795 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 MYH10P35580 1976 aa17.33■□□□□ 0.36
LINC00404-201ENST00000418660 O00370 1275 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 XPO1O14980 1071 aaKnown RBP17.32■□□□□ 0.36
LINC00404-201ENST00000418660 GREM1O60565 184 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 SLC6A11P48066 632 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 BCAT1P54687 386 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 GCNT1Q02742 428 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 GAD2Q05329 585 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 PDE4CQ08493 712 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 BST2Q10589 180 aaKnown RBP17.32■□□□□ 0.36
LINC00404-201ENST00000418660 C10orf120Q5SQS8 335 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 LY6G5CQ5SRR4 150 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 HEATR6Q6AI08 1181 aaKnown RBP17.32■□□□□ 0.36
LINC00404-201ENST00000418660 TMEM270Q6UE05 265 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 RPLP0P6Q8NHW5 317 aa17.32■□□□□ 0.36
LINC00404-201ENST00000418660 KAT5Q92993 513 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms