RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 MCF2LO15068 1137 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 EIF3HO15372 352 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 GRAP2O75791 330 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 AGTP01019 485 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 SHBGP04278 402 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 ODC1P11926 461 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PECAM1P16284 738 aaPredicted RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 CAPN2P17655 700 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 TYMPP19971 482 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PCSK1P29120 753 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 MAP2K2P36507 400 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 MATKP42679 507 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 CLCNKBP51801 687 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 AFF1P51825 1210 aaKnown RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PRMT2P55345 433 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC8A3P57103 927 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 MRPS5P82675 430 aaKnown RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 IFFO1Q0D2I5 559 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 TUSC3Q13454 348 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 P3H1Q32P28 736 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 ERMARDQ5T6L9 678 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 LHX8Q68G74 356 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 ZNF771Q7L3S4 317 aaPredicted RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM35AQ86V20 835 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 ECHDC2Q86YB7 292 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 RFX6Q8HWS3 928 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 SCUBE3Q8IX30 993 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PQLC3Q8N755 202 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PLD5Q8N7P1 536 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 CLEC4CQ8WTT0 213 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 HSPH1Q92598 858 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PRCCQ92733 491 aaPredicted RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 ZBTB9Q96C00 473 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 PKMYT1Q99640 499 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 RTP3Q9BQQ7 232 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 CAPS2Q9BXY5 557 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 NGRNQ9NPE2 291 aaKnown RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 MTMR10Q9NXD2 777 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 DDX43Q9NXZ2 648 aaKnown RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 NINJ2Q9NZG7 142 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 DSEQ9UL01 958 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 TPX2Q9ULW0 747 aaKnown RBP9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 USP3Q9Y6I4 520 aa9.45□□□□□ -0.9
LINCMD1-201ENST00000418518 MYO18AQ92614 2054 aaKnown RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 TET1Q8NFU7 2136 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 BCLAF3A2AJT9 711 aaKnown RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 HHLA1C9JL84 531 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 E7ESA3 106 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 TMEM189-UBE2V1I3L0A0 370 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 ATP2C2O75185 946 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM200BP0CF97 657 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 CKBP12277 381 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 TFE3P19532 575 aaPredicted RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 IGFBP6P24592 240 aaPredicted RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 STIP1P31948 543 aaKnown RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 L1CAMP32004 1257 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 NOS2P35228 1153 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 DAOAP59103 153 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 EIF3EP60228 445 aaKnown RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 PPP2R2AP63151 447 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM189BP81408 668 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 ATP11AP98196 1134 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 DSC1Q08554 894 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 ADIGQ0VDE8 80 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 GPS1Q13098 491 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 CA9Q16790 459 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 CDO1Q16878 200 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 SLC25A52Q3SY17 297 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 TIGD5Q53EQ6 642 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 ANKRD20A8PQ5CZ79 823 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 MDH1BQ5I0G3 518 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 UBAP2Q5T6F2 1119 aaKnown RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 KCTD16Q68DU8 428 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM171BQ6P995 826 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 GSTA5Q7RTV2 222 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 PCGF5Q86SE9 256 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 MYCBPAPQ8TBZ2 947 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 HAUS1Q96CS2 278 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 PGAP3Q96FM1 320 aaPredicted RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 GLT1D1Q96MS3 346 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 TTC25Q96NG3 672 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 SERPINB12Q96P63 405 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 NPY6RQ99463 290 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 SMOQ99835 787 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 ADAM2Q99965 735 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 ACBD6Q9BR61 282 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 CALN1Q9BXU9 219 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 STMN4Q9H169 189 aaPredicted RBP9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 LRRC4CQ9HCJ2 640 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 CSNK1G1Q9HCP0 422 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 PNPLA8Q9NP80 782 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 RGS18Q9NS28 235 aa9.44□□□□□ -0.9
LINCMD1-201ENST00000418518 KRT82Q9NSB4 513 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms