RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 FBXO44Q9H4M3 255 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 PRDM9Q9NQV7 894 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 WNT16Q9UBV4 365 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 DNAJC12Q9UKB3 198 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
RFC1-203ENST00000418436 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
RFC1-203ENST00000418436 TRAV19A0A0A6YYK7 116 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 C2orf78A6NCI8 922 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 TMEM221A6NGB7 291 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 BECN2A8MW95 431 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 M0R296 226 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 XPO1O14980 1071 aaKnown RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 OAS1P00973 400 aaKnown RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 ATP1A3P13637 1013 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 AVPR1AP37288 418 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 KIF11P52732 1056 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 BCAT1P54687 386 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 PDE4CQ08493 712 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 STILQ15468 1287 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 NFKBIBQ15653 356 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 GOLGA7BQ2TAP0 167 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 TMEM31Q5JXX7 168 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 KLHDC7AQ5VTJ3 777 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 CELF5Q8N6W0 485 aaKnown RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 USP13Q92995 863 aaPredicted RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 FBXO32Q969P5 355 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 CYP2S1Q96SQ9 504 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 TRMT61BQ9BVS5 477 aaKnown RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 NAA15Q9BXJ9 866 aaKnown RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 PLCB1Q9NQ66 1216 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 HESX1Q9UBX0 185 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 CHORDC1Q9UHD1 332 aaPredicted RBP11.09□□□□□ -0.63
RFC1-203ENST00000418436 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.09□□□□□ -0.63
RFC1-203ENST00000418436 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
RFC1-203ENST00000418436 FAM86C2PA6NEL3 165 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 LGALS16A8MUM7 142 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 TULP2O00295 520 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 ARNTLO00327 626 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 CAVIN2O95810 425 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 CALCAP01258 141 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 TPM2P07951 284 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 USP17L7P0C7H9 530 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 SETSIPP0DME0 302 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 KRT5P13647 590 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 TCF3P15923 654 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 HDCP19113 662 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 CDK11BP21127 795 aaKnown RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 RFX1P22670 979 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 PLA2G4AP47712 749 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 PGFP49763 221 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 TUBP50607 506 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 PDE6CP51160 858 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 SLC8A3P57103 927 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 SLC7A9P82251 487 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 PFKPQ01813 784 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 BST2Q10589 180 aaKnown RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 GRM2Q14416 872 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 MEA1Q16626 185 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 CCDC186Q7Z3E2 898 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 FAM71AQ8IYT1 594 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 ZNF276Q8N554 614 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 ARL14EPQ8N8R7 260 aaPredicted RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 UBA3Q8TBC4 463 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 BPIFB1Q8TDL5 484 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 SLC35F5Q8WV83 523 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 KCTD13Q8WZ19 329 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 DNASE1L2Q92874 299 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 LSM14BQ9BX40 385 aaKnown RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 RNF38Q9H0F5 515 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 SMG9Q9H0W8 520 aaKnown RBP11.08□□□□□ -0.64
RFC1-203ENST00000418436 TRPC7Q9HCX4 862 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 GMIPQ9P107 970 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 ARHGAP26Q9UNA1 814 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 CCL26Q9Y258 94 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 SIK3Q9Y2K2 1263 aa11.08□□□□□ -0.64
RFC1-203ENST00000418436 KRBA1A5PL33 1030 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 CHADO15335 359 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 CKMP06732 381 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 UCHL3P15374 230 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 GDI1P31150 447 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 RPL34P49207 117 aaKnown RBP11.07□□□□□ -0.64
RFC1-203ENST00000418436 ZXDBP98169 803 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 ARHGAP29Q52LW3 1261 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 FKBP15Q5T1M5 1219 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
RFC1-203ENST00000418436 PM20D1Q6GTS8 502 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms