RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 RBL1P28749 1068 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ZRSR2Q15696 482 aaKnown RBP12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ANKRD20A2Q5SQ80 823 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ANKRD20A1Q5TYW2 823 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 APBB1IPQ7Z5R6 666 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ARHGAP24Q8N264 748 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 MICAL1Q8TDZ2 1067 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 DNAI2Q9GZS0 605 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 RNPEPL1Q9HAU8 725 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 FAM49BQ9NUQ9 324 aa12.17□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 C2CD4BA6NLJ0 364 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TGM2P21980 687 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SERPINB4P48594 390 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TAZQ16635 292 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 CDKL3Q8IVW4 592 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 DHX35Q9H5Z1 703 aaKnown RBP12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 LMNAP02545 664 aaKnown RBP12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 CALB2P22676 271 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 GABRB2P47870 512 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SLC8A3P57103 927 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 CRYMQ14894 314 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 KIRREL3Q8IZU9 778 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 PLD5Q8N7P1 536 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 C12orf29Q8N999 325 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 FAM13CQ8NE31 585 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 OR6B3Q8NGW1 331 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 RFWD2Q8NHY2 731 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SRPK1Q96SB4 655 aaKnown RBP12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ASB14A6NK59 587 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SESN3P58005 492 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 LCLAT1Q6UWP7 414 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 IGDCC3Q8IVU1 814 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 CCDC110Q8TBZ0 833 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 NSL1Q96IY1 281 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 PEBP4Q96S96 227 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TBCBQ99426 244 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TMEM120AQ9BXJ8 343 aa12.16□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SERPINB3P29508 390 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 CCDC142Q17RM4 750 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 STK32AQ8WU08 396 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SERAC1Q96JX3 654 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 RILPQ96NA2 401 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 DHRS4Q9BTZ2 278 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TRIM6Q9C030 488 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TEX264Q9Y6I9 313 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ARF4P18085 180 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 MUM1Q2TAK8 710 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SLC10A6Q3KNW5 377 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 WASHC2DQ5SRD0 308 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 C6orf163Q5TEZ5 329 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 SESTD1Q86VW0 696 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 MYL2P10916 166 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ZFXP17010 805 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 MXRA7P84157 204 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 KCNJ11Q14654 390 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 C4orf22Q6V702 233 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 GPC2Q8N158 579 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TMEM130Q8N3G9 435 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ARMC2Q8NEN0 867 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 DEPDC1BQ8WUY9 529 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 PDZD7Q9H5P4 517 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 ETNK2Q9NVF9 386 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 TXNDC16Q9P2K2 825 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 C2CD2Q9Y426 696 aa12.15□□□□□ -0.46
CSPG4P3Y-201ENST00000418188 STK10O94804 968 aaKnown RBP12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 C22orf31O95567 290 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 IQCF3P0C7M6 154 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 SPDYAQ5MJ70 313 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 DLK2Q6UY11 383 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 CHSY1Q86X52 802 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 ERO1BQ86YB8 467 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 CRLF3Q8IUI8 442 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 ATP2A3Q93084 1043 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 BTBD10Q9BSF8 475 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 LTBP3Q9NS15 1303 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 TRDMT1O14717 391 aaKnown RBP12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 FGFR1P11362 822 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 CDK16Q00536 496 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 SLC6A3Q01959 620 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 FAM182AQ5T1J6 154 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 BSPRYQ5W0U4 402 aa12.14□□□□□ -0.47
CSPG4P3Y-201ENST00000418188 ILDR2Q71H61 639 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms