RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 NT5C3BQ969T7 300 aa21.73■■□□□ 1.07
CASC3-203ENST00000418132 HERC2P3Q9BVR0 1158 aa21.73■■□□□ 1.07
CASC3-203ENST00000418132 ZWILCHQ9H900 591 aa21.73■■□□□ 1.07
CASC3-203ENST00000418132 PCSK1NQ9UHG2 260 aa21.73■■□□□ 1.07
CASC3-203ENST00000418132 NR2E1Q9Y466 385 aa21.73■■□□□ 1.07
CASC3-203ENST00000418132 COL4A4P53420 1690 aaPredicted RBP21.73■■□□□ 1.07
CASC3-203ENST00000418132 TRIM66O15016 1216 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 FYNP06241 537 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 RHOXF2BP0C7M4 288 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 SYN1P17600 705 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 TFE3P19532 575 aaPredicted RBP21.72■■□□□ 1.07
CASC3-203ENST00000418132 SLC5A3P53794 718 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 ARPP19P56211 112 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 HDAC4P56524 1084 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 COPS2P61201 443 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 SLC25A52Q3SY17 297 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 STRADAQ7RTN6 431 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 SCN4BQ8IWT1 228 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 ZDHHC14Q8IZN3 488 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 SLITRK1Q96PX8 696 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 PEBP4Q96S96 227 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 RHOXF2Q9BQY4 288 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 ADAM33Q9BZ11 813 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 KLHL11Q9NVR0 708 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 INSL6Q9Y581 213 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 CDY1Q9Y6F8 540 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 VNN2O95498 520 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 LTFP02788 710 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 LINC00271P0C7V0 271 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 PPM1AP35813 382 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 DSG1Q02413 1049 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 SMC1AQ14683 1233 aaKnown RBP21.72■■□□□ 1.07
CASC3-203ENST00000418132 KIAA1841Q6NSI8 718 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 RNF19BQ6ZMZ0 732 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 BNIPLQ7Z465 357 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 ADAT2Q7Z6V5 191 aaKnown RBP21.72■■□□□ 1.07
CASC3-203ENST00000418132 DDX53Q86TM3 631 aaKnown RBP21.72■■□□□ 1.07
CASC3-203ENST00000418132 CCDC50Q8IVM0 306 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 CMASQ8NFW8 434 aaPredicted RBP21.72■■□□□ 1.07
CASC3-203ENST00000418132 SCAMP5Q8TAC9 235 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 RAPGEF5Q92565 580 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 RNF25Q96BH1 459 aaPredicted RBP21.72■■□□□ 1.07
CASC3-203ENST00000418132 NPY6RQ99463 290 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 AAASQ9NRG9 546 aa21.72■■□□□ 1.07
CASC3-203ENST00000418132 GOLGA6L10A0A0M3HER8 536 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 TCRBV7S2A1N4TA0A589 114 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 PI4K2BG5E9Z4 385 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 PRPSAP2O60256 369 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 SEC31AO94979 1220 aaKnown RBP21.71■■□□□ 1.07
CASC3-203ENST00000418132 RARAP10276 462 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 PTPN7P35236 360 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 CETN2P41208 172 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 SIX1Q15475 284 aaPredicted RBP21.71■■□□□ 1.07
CASC3-203ENST00000418132 SMTNL2Q2TAL5 461 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 GLE1Q53GS7 698 aaKnown RBP21.71■■□□□ 1.07
CASC3-203ENST00000418132 DCAF6Q58WW2 860 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 KCNT1Q5JUK3 1230 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 ZFYVE27Q5T4F4 411 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 ANKS1BQ7Z6G8 1248 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 SLC9A7Q96T83 725 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 TBCBQ99426 244 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 KRT12Q99456 494 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 HERPUD2Q9BSE4 406 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 LRRC1Q9BTT6 524 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 OSBPL8Q9BZF1 889 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 STAP1Q9ULZ2 295 aa21.71■■□□□ 1.07
CASC3-203ENST00000418132 C3orf70A6NLC5 250 aaPredicted RBP21.7■■□□□ 1.07
CASC3-203ENST00000418132 ADAM12O43184 909 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 ENDOD1O94919 500 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 RALAP11233 206 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 GLUD2P49448 558 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 SYPL2Q5VXT5 272 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 MFSD7Q6UXD7 560 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 FIBCD1Q8N539 461 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 TTC9BQ8N6N2 239 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 PHOSPHO2Q8TCD6 241 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 MAIP1Q8WWC4 291 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 ACSF2Q96CM8 615 aaPredicted RBP21.7■■□□□ 1.07
CASC3-203ENST00000418132 PNKPQ96T60 521 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 ZBED2Q9BTP6 218 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 FAM53CQ9NYF3 392 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 MTUS1Q9ULD2 1270 aa21.7■■□□□ 1.07
CASC3-203ENST00000418132 WDR27A2RRH5 827 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 LRRD1A4D1F6 860 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 ROR1Q01973 937 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 KLF1Q13351 362 aaPredicted RBP21.7■■□□□ 1.06
CASC3-203ENST00000418132 PPP2R5EQ16537 467 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 DDR2Q16832 855 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 BOLA3Q53S33 107 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 ODF2Q5BJF6 829 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 OTUD1Q5VV17 481 aaPredicted RBP21.7■■□□□ 1.06
CASC3-203ENST00000418132 CCDC70Q6NSX1 233 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 C8orf74Q6P047 294 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 SPOCD1Q6ZMY3 1216 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 BEND5Q7L4P6 421 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 HERC6Q8IVU3 1022 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 KLHL7Q8IXQ5 586 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 PRELID2Q8N945 189 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 TEKT4Q8WW24 435 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 CLP1Q92989 425 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms