RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 OSER1Q9NX31 292 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 CYTH4Q9UIA0 394 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 NAGPAQ9UK23 515 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 CUL9Q8IWT3 2517 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 PI4K2BG5E9Z4 385 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 COCHO43405 550 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 TLR5O60602 858 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 ZBED1O96006 694 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 MBL2P11226 248 aaPredicted RBP13.12□□□□□ -0.31
SKA1-203ENST00000417656 PFKLP17858 780 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 PSMC3P17980 439 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 HDCP19113 662 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 STAT1P42224 750 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 TUBP50607 506 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 BPIFB4P59827 614 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 GPC5P78333 572 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 PDCLQ13371 301 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
SKA1-203ENST00000417656 HECTD3Q5T447 861 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 SNX30Q5VWJ9 437 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 BHLHA9Q7RTU4 235 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
SKA1-203ENST00000417656 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 SLC20A1Q8WUM9 679 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 EDAQ92838 391 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 E2F7Q96AV8 911 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
SKA1-203ENST00000417656 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 OBP2AQ9NY56 170 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 NOCTQ9UK39 431 aaKnown RBP13.12□□□□□ -0.31
SKA1-203ENST00000417656 ARHGAP26Q9UNA1 814 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 CPQQ9Y646 472 aa13.12□□□□□ -0.31
SKA1-203ENST00000417656 FAM170AA1A519 330 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 FAM86C2PA6NEL3 165 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 E5RJQ4 531 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 MDM4O15151 490 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 RARGP13631 454 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 GDI1P31150 447 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 KRT9P35527 623 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 TIE1P35590 1138 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 PBX1P40424 430 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 DAOAP59103 153 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 YWHAGP61981 247 aaKnown RBP eCLIP13.11□□□□□ -0.31
SKA1-203ENST00000417656 SLC7A9P82251 487 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 SIGLEC14Q08ET2 396 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 ZNF77Q15935 545 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 MFSD6LQ8IWD5 586 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 DDX1Q92499 740 aaKnown RBP13.11□□□□□ -0.31
SKA1-203ENST00000417656 BAP1Q92560 729 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 ZFYVE19Q96K21 471 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 HSFY1Q96LI6 401 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
SKA1-203ENST00000417656 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 NACA2Q9H009 215 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 MIS12Q9H081 205 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 CYLDQ9NQC7 956 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 CNGB3Q9NQW8 809 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 SLC2A4RGQ9NR83 387 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
SKA1-203ENST00000417656 TJP2Q9UDY2 1190 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 NUDT5Q9UKK9 219 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 TECTAO75443 2155 aa13.11□□□□□ -0.31
SKA1-203ENST00000417656 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 E7ENQ6 273 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 SCAMP3O14828 347 aaKnown RBP13.1□□□□□ -0.31
SKA1-203ENST00000417656 MMEP08473 750 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 RPL34P49207 117 aaKnown RBP13.1□□□□□ -0.31
SKA1-203ENST00000417656 PSEN1P49768 467 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 ZXDBP98169 803 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 ARID5AQ03989 594 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 MTF1Q14872 753 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 C10orf120Q5SQS8 335 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 PM20D1Q6GTS8 502 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 TRIM67Q6ZTA4 783 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 ASIC4Q96FT7 647 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
SKA1-203ENST00000417656 CPXM1Q96SM3 734 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 BRD9Q9H8M2 597 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 FBXL21Q9UKT6 434 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
SKA1-203ENST00000417656 TMEM221A6NGB7 291 aa13.09□□□□□ -0.31
SKA1-203ENST00000417656 M0R296 226 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms