RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LINC00597Q9H2U6 94 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 MMRN2Q9H8L6 949 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.13■□□□□ 0.656e-7■■■□□ 17.1
VCP-202ENST00000417448 TMLHEQ9NVH6 421 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 MAGED2Q9UNF1 606 aaPredicted RBP19.13■□□□□ 0.65
VCP-202ENST00000417448 FRMD4BQ9Y2L6 1034 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 MYOFQ9NZM1 2061 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 MAST4O15021 2626 aa19.13■□□□□ 0.65
VCP-202ENST00000417448 MYO18AQ92614 2054 aaKnown RBP19.12■□□□□ 0.65
VCP-202ENST00000417448 PSMA7O14818 248 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 IFNAR2P48551 515 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 STIM1Q13586 685 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 SURF1Q15526 300 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 DUOXA2Q1HG44 320 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 ZNF423Q2M1K9 1284 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 MAP7D1Q3KQU3 841 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 TRAPPC11Q7Z392 1133 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 DHTKD1Q96HY7 919 aaPredicted RBP19.12■□□□□ 0.65
VCP-202ENST00000417448 MED15Q96RN5 788 aa19.12■□□□□ 0.65
VCP-202ENST00000417448 GTPBP2Q9BX10 602 aaKnown RBP19.12■□□□□ 0.65
VCP-202ENST00000417448 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.12■□□□□ 0.65
VCP-202ENST00000417448 KALRNO60229 2985 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 ASXL3Q9C0F0 2248 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 CFIP05156 583 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 CD59P13987 128 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 RPL13P26373 211 aaKnown RBP19.11■□□□□ 0.65
VCP-202ENST00000417448 MESP2Q0VG99 397 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 NFIL3Q16649 462 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 EDRF1Q3B7T1 1238 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 LYSMD4Q5XG99 296 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 TTI2Q6NXR4 508 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 NT5DC4Q86YG4 428 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 WDR49Q8IV35 697 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 HDDC3Q8N4P3 179 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 ALLCQ8N6M5 410 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 HNRNPLLQ8WVV9 542 aaKnown RBP19.11■□□□□ 0.65
VCP-202ENST00000417448 CAMK1GQ96NX5 476 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 TRPC7Q9HCX4 862 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 TMEM63CQ9P1W3 806 aa19.11■□□□□ 0.65
VCP-202ENST00000417448 SGK1O00141 431 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 CYB561D2O14569 222 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 CETN3O15182 167 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 MAP3K13O43283 966 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 PSMC2P35998 433 aaKnown RBP19.1■□□□□ 0.65
VCP-202ENST00000417448 TAF6P49848 677 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 VAMP7P51809 220 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 RBP5P82980 135 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 DPCR1Q3MIW9 517 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 TDRD10Q5VZ19 366 aaKnown RBP19.1■□□□□ 0.65
VCP-202ENST00000417448 WSCD1Q658N2 575 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 TRIML1Q8N9V2 468 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 CCDC26Q8TAB7 109 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 MDM1Q8TC05 714 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 WHAMMQ8TF30 809 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 SPACA7Q96KW9 195 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 CAPN10Q9HC96 672 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 ITGA11Q9UKX5 1188 aa19.1■□□□□ 0.65
VCP-202ENST00000417448 OPHN1O60890 802 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 PHACTR2O75167 634 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 VNN1O95497 513 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 MBD3O95983 291 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 CKMP06732 381 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 CSH1P0DML2 217 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 CSH2P0DML3 217 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 RDXP35241 583 aaKnown RBP19.09■□□□□ 0.65
VCP-202ENST00000417448 GCLMP48507 274 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 MYL6P60660 151 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 SMARCB1Q12824 385 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 PAK1Q13153 545 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 BIRC3Q13489 604 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 MINDY1Q8N5J2 469 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 IL17RCQ8NAC3 791 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 TXNDC5Q8NBS9 432 aaKnown RBP19.09■□□□□ 0.65
VCP-202ENST00000417448 ADAM32Q8TC27 787 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 SH3RF2Q8TEC5 729 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 TMEM174Q8WUU8 243 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 PI4K2AQ9BTU6 479 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 GTPBP4Q9BZE4 634 aaKnown RBP19.09■□□□□ 0.65
VCP-202ENST00000417448 CCDC86Q9H6F5 360 aaKnown RBP19.09■□□□□ 0.65
VCP-202ENST00000417448 ZDHHC4Q9NPG8 344 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 GCNT4Q9P109 453 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 DSEQ9UL01 958 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 SLC6A14Q9UN76 642 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 RAXQ9Y2V3 346 aa19.09■□□□□ 0.65
VCP-202ENST00000417448 URB1O60287 2271 aaKnown RBP19.08■□□□□ 0.65
VCP-202ENST00000417448 TRAV19A0A0A6YYK7 116 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 KPNA7A9QM74 516 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 ALDH1A2O94788 518 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 NOL4O94818 638 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 C4BPAP04003 597 aaKnown RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 USP17L7P0C7H9 530 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 ATXN3P54252 364 aaPredicted RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 ZXDBP98169 803 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 FKBP3Q00688 224 aaKnown RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 LRRC63Q05C16 580 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 DDR2Q16832 855 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 SPDYCQ5MJ68 293 aa19.08■□□□□ 0.64
VCP-202ENST00000417448 CAVIN1Q6NZI2 390 aaKnown RBP19.08■□□□□ 0.64
VCP-202ENST00000417448 CCNI2Q6ZMN8 369 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms