RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 CACNA1BQ00975 2339 aa7.72□□□□□ -1.17
CASP4-202ENST00000417440 F8VP50 259 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 SGK1O00141 431 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CLDN5O00501 218 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CDX4O14627 284 aaPredicted RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 LILRA1O75019 489 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CYP17A1P05093 508 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CFIP05156 583 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 MBL2P11226 248 aaPredicted RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 HNRNPLP14866 589 aaKnown RBP eCLIP7.71□□□□□ -1.18
CASP4-202ENST00000417440 GNL1P36915 607 aaPredicted RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 STAT6P42226 847 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 PTGER3P43115 390 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 MAGEA11P43364 429 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 SCTRP47872 440 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 PDE6CP51160 858 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 MESP2Q0VG99 397 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 TAF10Q12962 218 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 RESTQ13127 1097 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 DHCR24Q15392 516 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CRY1Q16526 586 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 DUOXA2Q1HG44 320 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 GAB4Q2WGN9 574 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 TRIM61Q5EBN2 209 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 TDRD10Q5VZ19 366 aaKnown RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 DENND5BQ6ZUT9 1274 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 BRAPQ7Z569 592 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 C11orf74Q86VG3 221 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 RASSF3Q86WH2 238 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CBWD2Q8IUF1 395 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 ADGRG2Q8IZP9 1017 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 GPD1LQ8N335 351 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 PDILTQ8N807 584 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 NAT16Q8N8M0 369 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 GLIS3Q8NEA6 775 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CXorf38Q8TB03 319 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 KBTBD7Q8WVZ9 684 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 HMGB4Q8WW32 186 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 PCED1BQ96HM7 432 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 FUBP3Q96I24 572 aaKnown RBP eCLIP7.71□□□□□ -1.18
CASP4-202ENST00000417440 SPATA17Q96L03 361 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 CNOT6LQ96LI5 555 aaKnown RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 PNKPQ96T60 521 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 MRPL45Q9BRJ2 306 aaKnown RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 SCNM1Q9BWG6 230 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 GTPBP2Q9BX10 602 aaKnown RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 NUSAP1Q9BXS6 441 aaKnown RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 ARHGEF4Q9NR80 690 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 TMPRSS4Q9NRS4 437 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 FBXO2Q9UK22 296 aaPredicted RBP7.71□□□□□ -1.18
CASP4-202ENST00000417440 PCDHGA11Q9Y5H2 935 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 ACACBO00763 2458 aa7.71□□□□□ -1.18
CASP4-202ENST00000417440 FRYQ5TBA9 3013 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 NUP210Q8TEM1 1887 aaPredicted RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 SPAARA0A1B0GVQ0 90 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 TCRBV21S2A2A0A5A6 115 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 TBC1D3BA6NDS4 549 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 ZNF840PA6NDX5 716 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 ZNF233A6NK53 670 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 KAT7O95251 611 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 CST3P01034 146 aaPredicted RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 APODP05090 189 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 DLATP10515 647 aaKnown RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 IRF1P10914 325 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 ADH5P11766 374 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 CEACAM1P13688 526 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 ENGP17813 658 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 P2RY2P41231 377 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 WASP42768 502 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 CACNA2D1P54289 1103 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 TNNC1P63316 161 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 MRPS21P82921 87 aaKnown RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 MAPRE1Q15691 268 aaKnown RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 RHBDF2Q6PJF5 856 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 VSTM1Q6UX27 236 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 CCDC73Q6ZRK6 1079 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 DPH6Q7L8W6 267 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 C12orf40Q86WS4 652 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 CCDC65Q8IXS2 484 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 IL17RCQ8NAC3 791 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 CCDC127Q96BQ5 260 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 SPACA7Q96KW9 195 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 FNBP1Q96RU3 617 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 MED10Q9BTT4 135 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 ZNF518BQ9C0D4 1074 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 DPEP3Q9H4B8 488 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 TMEM74BQ9NUR3 256 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 INTS13Q9NVM9 706 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 EHD2Q9NZN4 543 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 NXF1Q9UBU9 619 aaKnown RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 CHORDC1Q9UHD1 332 aaPredicted RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 MBD1Q9UIS9 605 aaPredicted RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 SRPRBQ9Y5M8 271 aaKnown RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 TSC2P49815 1807 aa7.7□□□□□ -1.18
CASP4-202ENST00000417440 TPRP12270 2363 aaKnown RBP7.7□□□□□ -1.18
CASP4-202ENST00000417440 KIF26AQ9ULI4 1882 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms