RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CCDC25Q86WR0 208 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 COLGALT2Q8IYK4 626 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 DIS3LQ8TF46 1054 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 GRK7Q8WTQ7 553 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 SUSD3Q96L08 255 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 B3GALT6Q96L58 329 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 RUFY1Q96T51 708 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 SNRNP25Q9BV90 132 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 HOMER3Q9NSC5 361 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 LRFN2Q9ULH4 789 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 MAP3K6O95382 1288 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 PECAM1P16284 738 aaPredicted RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 DESP17661 470 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 HSD17B3P37058 310 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 SULT1E1P49888 294 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 YWHAHQ04917 246 aaPredicted RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 DSC1Q08554 894 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 EFHC1Q5JVL4 640 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 SYPL2Q5VXT5 272 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM131BQ86XD5 332 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 THEM5Q8N1Q8 247 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 TAB3Q8N5C8 712 aaPredicted RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 OR2W6PQ8NHA6 318 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 ADAM32Q8TC27 787 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 SEPT8Q92599 483 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 SMARCD1Q96GM5 515 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 ACBD6Q9BR61 282 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 MAK16Q9BXY0 300 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 DHX35Q9H5Z1 703 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMPRSS4Q9NRS4 437 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 DNAJC17Q9NVM6 304 aaKnown RBP11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMEM161AQ9NX61 479 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 VPS18Q9P253 973 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAN1Q9Y2M0 1017 aa11.15□□□□□ -0.62
SMPD4P1-201ENST00000416717 YJEFN3A6XGL0 299 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 NT5C1B-RDH14C9J2C7 533 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 E7ENQ6 273 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 SGK1O00141 431 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 TADA2AO75478 443 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 UPP2O95045 317 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 IFNB1P01574 187 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 KRT14P02533 472 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 CYP11A1P05108 521 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 PTPN7P35236 360 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 HSPA9P38646 679 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 YWHAZP63104 245 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 TLE2Q04725 743 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 CALCOCO2Q13137 446 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 NME3Q13232 169 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 DPYSL3Q14195 570 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 UAP1Q16222 522 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 C1orf228Q6PIY5 440 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC39A5Q6ZMH5 540 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 TMC3Q7Z5M5 1100 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 CCDC185Q8N715 623 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 EIF1ADQ8N9N8 165 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 STKLD1Q8NE28 680 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 LRRN4Q8WUT4 740 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLCO2A1Q92959 643 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 CYLDQ9NQC7 956 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 FEZ2Q9UHY8 353 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 DSEQ9UL01 958 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 NAALADL1Q9UQQ1 740 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 PLAAQ9Y263 795 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 FNDC1Q4ZHG4 1894 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 TANC1Q9C0D5 1861 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 CAPN9O14815 690 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 INPPL1O15357 1258 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 ATF2P15336 505 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 MATKP42679 507 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 DRG2P55039 364 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 TSPY1Q01534 308 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 FAAP100Q0VG06 881 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 PTK6Q13882 451 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 LRRC45Q96CN5 670 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 PWWP2AQ96N64 755 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 ATP11BQ9Y2G3 1177 aa11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.14□□□□□ -0.63
SMPD4P1-201ENST00000416717 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 RNF40O75150 1001 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 CYP2F1P24903 491 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 PTPN9P43378 593 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 ITGA8P53708 1063 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 NRLP54845 237 aa11.13□□□□□ -0.63
SMPD4P1-201ENST00000416717 VCPP55072 806 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms