RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 RICTORQ6R327 1708 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ZNF280DQ6N043 979 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 TIGD7Q6NT04 549 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PALB2Q86YC2 1186 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 CD302Q8IX05 232 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 RUBCNQ92622 972 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SEC16BQ96JE7 1060 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 RANBP17Q9H2T7 1088 aaKnown RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ITGA11Q9UKX5 1188 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PLA2G4CQ9UP65 541 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 MYH7P12883 1935 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ADGRB1O14514 1584 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 MTSS1O43312 755 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 HOXA2O43364 376 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SUPT7LO94864 414 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 GEMP55040 296 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 RPL10AP62906 217 aaKnown RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SLC39A12Q504Y0 691 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 BOLA3Q53S33 107 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 OTOAQ7RTW8 1153 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 OOSP2Q86WS3 158 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 OSBPL1AQ9BXW6 950 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 USP15Q9Y4E8 981 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 EML1O00423 815 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 JCHAINP01591 159 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 FGFR1P11362 822 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 BDNFP23560 247 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 HSD17B3P37058 310 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 HPCAP84074 193 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 KCNB2Q92953 911 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 MAGED4Q96JG8 741 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 ATXN3LQ9H3M9 355 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PSD3Q9NYI0 1048 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PTPN11Q06124 597 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 LLGL2Q6P1M3 1020 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 SV2AQ7L0J3 742 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 STRA8Q7Z7C7 330 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 MYCBPQ99417 103 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-203ENST00000416123 PDGFCQ9NRA1 345 aa10.98□□□□□ -0.65
COL12A1-203ENST00000416123 NKRFO15226 690 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 IGFBP4P22692 258 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 VPS50Q96JG6 964 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 SNCAIPQ9Y6H5 919 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 CAPN6Q9Y6Q1 641 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 MYPNQ86TC9 1320 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 OR1E1P30953 314 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 SLC26A2P50443 739 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 OCA2Q04671 838 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 BST2Q10589 180 aaKnown RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 ERMARDQ5T6L9 678 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 MOXD1Q6UVY6 613 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 E2F7Q96AV8 911 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 KPNA6O60684 536 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 GJB6O95452 261 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 RHOAP61586 193 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 ALDH6A1Q02252 535 aaKnown RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 NTRK3Q16288 839 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 AGAP9Q5VTM2 703 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 ERAP2Q6P179 960 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 YY1AP1Q9H869 796 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 TISP43B9A030 160 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 CHI3L1P36222 383 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 MYO1CO00159 1063 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 RARRES1P49788 294 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 SLC16A1P53985 500 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 KCNK10P57789 538 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 C16orf89Q6UX73 402 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 UCMAQ8WVF2 138 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 IL17RAQ96F46 866 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 MYH10P35580 1976 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 TPH1P17752 444 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 HIST2H2ACQ16777 129 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 HIST2H2AA3Q6FI13 130 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 SYT15Q9BQS2 421 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 ABHD16BQ9H3Z7 469 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 H2AFYO75367 372 aaKnown RBP10.97□□□□□ -0.65
COL12A1-203ENST00000416123 PGK1P00558 417 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 AKR1A1P14550 325 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 MLH1P40692 756 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 STARD3Q14849 445 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 MYH8P13535 1937 aa10.97□□□□□ -0.65
COL12A1-203ENST00000416123 PLA2G6O60733 806 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 TGFB3P10600 412 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 TARSP26639 723 aaKnown RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 CAMK2GQ13555 558 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-203ENST00000416123 LRIG3Q6UXM1 1119 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 KCTD17Q8N5Z5 321 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 PCYOX1LQ8NBM8 494 aa10.96□□□□□ -0.65
COL12A1-203ENST00000416123 GIMAP4Q9NUV9 329 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms