RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 JAKMIP2Q96AA8 810 aa17.9■□□□□ 0.46
SCAMP4-204ENST00000414057 CHP1Q99653 195 aa17.9■□□□□ 0.46
SCAMP4-204ENST00000414057 PRMT8Q9NR22 394 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-204ENST00000414057 TDP1Q9NUW8 608 aa17.9■□□□□ 0.46
SCAMP4-204ENST00000414057 EPN1Q9Y6I3 576 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-204ENST00000414057 EIF3CLB5ME19 914 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 HLA-DRAP01903 254 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 CHRNB1P11230 501 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 CTHP32929 405 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 SOX5P35711 763 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 GNL1P36915 607 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 GRIK1P39086 918 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 PDE6CP51160 858 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 KRT83P78385 493 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 ZNF268Q14587 947 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 DRAP1Q14919 205 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 ITPRIPL2Q3MIP1 535 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 HGSNATQ68CP4 663 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 TMEM150AQ86TG1 271 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 OR6B3Q8NGW1 331 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 MYCBPAPQ8TBZ2 947 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 MYLPFQ96A32 169 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 EXOC4Q96A65 974 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 FAXDC2Q96IV6 333 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 LRRC3BQ96PB8 259 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 EIF3CQ99613 913 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 HINFPQ9BQA5 517 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 DEF6Q9H4E7 631 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 UBE2TQ9NPD8 197 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 GTSE1Q9NYZ3 720 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 ARHGAP20Q9P2F6 1191 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 PPP2R2CQ9Y2T4 447 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 ADGRG1Q9Y653 693 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 COL4A3Q01955 1670 aa17.89■□□□□ 0.45
SCAMP4-204ENST00000414057 TRIM66O15016 1216 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TUBB4AP04350 444 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 PDGFRBP09619 1106 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 LMO2P25791 158 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 PSMC1P62191 440 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 CYP27A1Q02318 531 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 KLHL30Q0D2K2 578 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TXNDC8Q6A555 127 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TOGARAM2Q6ZUX3 1019 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TXLNBQ8N3L3 684 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 ZBTB44Q8NCP5 570 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 RUBCNQ92622 972 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TAF4BQ92750 862 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 ZFYVE19Q96K21 471 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 SPATA17Q96L03 361 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TRAV19A0A0A6YYK7 116 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 ATP2C2O75185 946 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 GFPT2O94808 682 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 CLSTN1O94985 981 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 LCA5LO95447 670 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 VNN1O95497 513 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 USP17L7P0C7H9 530 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TBXAS1P24557 533 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 CXCL12P48061 93 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 NCOA4Q13772 614 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 SGSM1Q2NKQ1 1148 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TDRD12Q587J7 1177 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 DENND5BQ6ZUT9 1274 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 IRF2BP2Q7Z5L9 587 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 VPS36Q86VN1 386 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 ARHGEF19Q8IW93 802 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 PPM1KQ8N3J5 372 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 SYNPOQ8N3V7 929 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 SPEM1Q8N4L4 309 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 NELL1Q92832 810 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 USP13Q92995 863 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 SECISBP2LQ93073 1101 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 SMG9Q9H0W8 520 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 TRPC7Q9HCX4 862 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 CRTAC1Q9NQ79 661 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 GKN1Q9NS71 199 aa17.88■□□□□ 0.45
SCAMP4-204ENST00000414057 ZFHX2Q9C0A1 2572 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 KIF2AO00139 706 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 HCRTO43612 131 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 PFKLP17858 780 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 BDNFP23560 247 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 CLCN1P35523 988 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 EIF4A3P38919 411 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 SOX9P48436 509 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 PPP3CCP48454 512 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 RUNX3Q13761 415 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 MTF1Q14872 753 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 PDGFRLQ15198 375 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 SPA17Q15506 151 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 GJB7Q6PEY0 223 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 TTC8Q8TAM2 541 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 SHC3Q92529 594 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 PCED1BQ96HM7 432 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 PPP1R13BQ96KQ4 1090 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 FAM83CQ9BQN1 747 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 MRPL45Q9BRJ2 306 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 VRTNQ9H8Y1 702 aa17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 LUC7LQ9NQ29 371 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 NXF1Q9UBU9 619 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-204ENST00000414057 AJAP1Q9UKB5 411 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms