RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 KLK13Q9UKR3 277 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 SLC6A14Q9UN76 642 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 PCNX2A6NKB5 2137 aa12.92□□□□□ -0.34
LIMS2-210ENST00000413578 TNRC6BQ9UPQ9 1833 aaKnown RBP12.92□□□□□ -0.34
LIMS2-210ENST00000413578 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 SPAARA0A1B0GVQ0 90 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 A8MXQ7 604 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 TRIM24O15164 1050 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 AP5Z1O43299 807 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 ABL1P00519 1130 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 PDCP20941 246 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-210ENST00000413578 SLC5A3P53794 718 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 MYL6P60660 151 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-210ENST00000413578 CEBPZQ03701 1054 aaKnown RBP12.91□□□□□ -0.34
LIMS2-210ENST00000413578 DUOXA1Q1HG43 343 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 STXBP4Q6ZWJ1 553 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 FAM35AQ86V20 835 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 PDILTQ8N807 584 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 CEP76Q8TAP6 659 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 PLEKHO2Q8TD55 490 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 ZCCHC14Q8WYQ9 949 aaKnown RBP12.91□□□□□ -0.34
LIMS2-210ENST00000413578 FBXO32Q969P5 355 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 CCSER2Q9H7U1 834 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 PLXND1Q9Y4D7 1925 aa12.91□□□□□ -0.34
LIMS2-210ENST00000413578 PCDH15Q96QU1 1955 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 IGHV1OR15-9A0A0B4J2B8 117 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 GJB3O75712 270 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 CD59P13987 128 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 TNNI1P19237 187 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 SYT1P21579 422 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 ATICP31939 592 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 PGFP49763 221 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 SNRPFP62306 86 aaKnown RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 TNNC1P63316 161 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 FAM193AP78312 1265 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 RPL6Q02878 288 aaKnown RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 ZNF33AQ06730 810 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 COL9A2Q14055 689 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 HECTD3Q5T447 861 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 SLC36A4Q6YBV0 504 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 HTR3DQ70Z44 454 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 TRMT11Q7Z4G4 463 aaKnown RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 RDH13Q8NBN7 331 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 ZMIZ2Q8NF64 920 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 SCFD1Q8WVM8 642 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 DNAAF2Q9NVR5 837 aaKnown RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 COMMD8Q9NX08 183 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 MARK1Q9P0L2 795 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 GMIPQ9P107 970 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 DEC1Q9P2X7 70 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 CHORDC1Q9UHD1 332 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-210ENST00000413578 FREM2Q5SZK8 3169 aa12.9□□□□□ -0.34
LIMS2-210ENST00000413578 UBE4BO95155 1302 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 DSPP15924 2871 aaKnown RBP12.89□□□□□ -0.35
LIMS2-210ENST00000413578 H0Y626 953 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 TAF4O00268 1085 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 CACNG3O60359 315 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 TRIM16O95361 564 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 CFIP05156 583 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 HOXB2P14652 356 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 NDUFV2P19404 249 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 NTSR1P30989 418 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 CLDN10P78369 228 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 BMT2Q1RMZ1 405 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 PREPLQ4J6C6 727 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-210ENST00000413578 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 BTBD8Q5XKL5 378 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 EGFLAMQ63HQ2 1017 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 RABEPKQ7Z6M1 372 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 FUKQ8N0W3 1084 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 ACOX2Q99424 681 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 SMOQ99835 787 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 GABRG3Q99928 467 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 CUEDC2Q9H467 287 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 DMAP1Q9NPF5 467 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-210ENST00000413578 MTMR6Q9Y217 621 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 SH3BP1Q9Y3L3 701 aa12.89□□□□□ -0.35
LIMS2-210ENST00000413578 ANKRD11Q6UB99 2663 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-210ENST00000413578 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms