RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DOCK1Q14185 1865 aa8.87□□□□□ -0.99
SYNE1-211ENST00000413186 I3L4J1 428 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ZBTB16Q05516 673 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ADCY2Q08462 1091 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ZNF662Q6ZS27 426 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PHF13Q86YI8 300 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 HERC6Q8IVU3 1022 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CCDC110Q8TBZ0 833 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 KAT2BQ92831 832 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 MRRFQ96E11 262 aaKnown RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 IFT43Q96FT9 208 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 DCLK3Q9C098 648 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 TUBGCP6Q96RT7 1819 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 SPECC1L-ADORA2AF8WAN1 911 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ZNF623O75123 536 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CILPO75339 1184 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CST3P01034 146 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 KRT14P02533 472 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 LPIN1Q14693 890 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 TRIP13Q15645 432 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 P3H1Q32P28 736 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 GKAP1Q5VSY0 366 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 HHATQ5VTY9 493 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 FUT10Q6P4F1 479 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 EXD1Q8NHP7 514 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 MYLPFQ96A32 169 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ACBD6Q9BR61 282 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 TMEM175Q9BSA9 504 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CNTN3Q9P232 1028 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 INSL6Q9Y581 213 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 MYADML2A6NDP7 307 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 SMAPO00193 183 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 DFFAO00273 331 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 BNIP3LO60238 219 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 LZTS3O60299 673 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CST8O60676 142 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 MYL4P12829 197 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PAMP19021 973 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 NOS2P35228 1153 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 BBS9Q3SYG4 887 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 LCLAT1Q6UWP7 414 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 SLC39A5Q6ZMH5 540 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PID1Q7Z2X4 250 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PIGZQ86VD9 579 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 FLCNQ8NFG4 579 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 COG1Q8WTW3 980 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 RPRD1AQ96P16 312 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PACSIN1Q9BY11 444 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ULBP1Q9BZM6 244 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 LACRTQ9GZZ8 138 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 DDX47Q9H0S4 455 aaKnown RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PRDM16Q9HAZ2 1276 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 GOLGA2P5Q9HBQ8 144 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CNGB3Q9NQW8 809 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PDLIM7Q9NR12 457 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 BFARQ9NZS9 450 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 USH1CQ9Y6N9 552 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 E5RJQ4 531 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PHF2O75151 1096 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CXCL14O95715 111 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 INHBAP08476 426 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 IRF1P10914 325 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PCK1P35558 622 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 AMPD2Q01433 879 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ZNF177Q13360 481 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 THOC5Q13769 683 aaKnown RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 MTFR1Q15390 333 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 PAPD7Q5XG87 772 aaKnown RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 DENND1BQ6P3S1 775 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 FAM35AQ86V20 835 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 CACNA2D3Q8IZS8 1091 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 KREMEN1Q96MU8 473 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 GDAP1L1Q96MZ0 367 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 DUSP16Q9BY84 665 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ADAMTS10Q9H324 1103 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ZMYND8Q9ULU4 1186 aaPredicted RBP8.86□□□□□ -0.99
SYNE1-211ENST00000413186 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
SYNE1-211ENST00000413186 ARHGAP42A6NI28 874 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 SIGLEC16A6NMB1 481 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 XPO1O14980 1071 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 EPHB6O15197 1021 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ERBB2P04626 1255 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 GLI1P08151 1106 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 CLCNKBP51801 687 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 DHX9Q08211 1270 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 RINLQ6ZS11 566 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ZC3H18Q86VM9 953 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 NUP93Q8N1F7 819 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 EFHBQ8N7U6 833 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 BCAS4Q8TDM0 211 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 PYROXD1Q8WU10 500 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 PCNTO95613 3336 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FAM155AB1AL88 458 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 TBX4P57082 545 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 TERF2Q15554 542 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 C2CD6Q53TS8 623 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ZNF449Q6P9G9 518 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms