RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 TCF7P36402 384 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 NCOA4Q13772 614 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 TMEM132DQ14C87 1099 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 APOBEC3HQ6NTF7 200 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 ARPINQ7Z6K5 226 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 PIGWQ7Z7B1 504 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 SATL1Q86VE3 508 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 C4orf33Q8N1A6 199 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 VGLL2Q8N8G2 317 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 PGBD4Q96DM1 585 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 PAWRQ96IZ0 340 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 B3GALT6Q96L58 329 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 AASDHPPTQ9NRN7 309 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 COPG2Q9UBF2 871 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 PLAGL2Q9UPG8 496 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 HEY1Q9Y5J3 304 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 BOLA2-SMG1P6H3BVE0 249 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 FBP2O00757 339 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 EIF3DO15371 548 aaKnown RBP eCLIP8.8□□□□□ -1
PBRM1-209ENST00000412587 MYCLP1P12525 358 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 FCGRTP55899 365 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 ZNF211Q13398 564 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 CDKAL1Q5VV42 579 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 AAGABQ6PD74 315 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 RFFLQ8WZ73 363 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 AGPAT1Q99943 283 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 LRRC4BQ9NT99 713 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 APEX2Q9UBZ4 518 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 IP6K2Q9UHH9 426 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 CES2O00748 559 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 TRAF2Q12933 501 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 TRIM25Q14258 630 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 ATF7IP2Q5U623 682 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 PLEKHH3Q7Z736 793 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 ELMOD1Q8N336 334 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 HSPBAP1Q96EW2 488 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 TARS2Q9BW92 718 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 FOXP3Q9BZS1 431 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 DDX4Q9NQI0 724 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 KLHL8Q9P2G9 620 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 HPSEQ9Y251 543 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 KIF1AQ12756 1690 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 A0A0J9YVX5 310 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 WBP4O75554 376 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 MTRF1O75570 445 aaKnown RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 SULT2A1Q06520 285 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 TSTA3Q13630 321 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 PTPAQ15257 358 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 RASA2Q15283 850 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 GRPEL2Q8TAA5 225 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 FNDC8Q8TC99 324 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 GLT1D1Q96MS3 346 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 MKNK1Q9BUB5 465 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 KLC2Q9H0B6 622 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 DENND2DQ9H6A0 471 aaPredicted RBP8.8□□□□□ -1
PBRM1-209ENST00000412587 TMEM98Q9Y2Y6 226 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 IPPQ9Y573 584 aa8.8□□□□□ -1
PBRM1-209ENST00000412587 CENPXA8MT69 81 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 ARP10275 920 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 CPT1AP50416 773 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 FAM228AQ86W67 206 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 RHOT1Q8IXI2 618 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 GPC2Q8N158 579 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 AFG1LQ8WV93 481 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 C17orf75Q9HAS0 396 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 RPRD1BQ9NQG5 326 aaKnown RBP8.79□□□□□ -1
PBRM1-209ENST00000412587 ADA2Q9NZK5 511 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 PSMC3IPQ9P2W1 217 aaPredicted RBP8.79□□□□□ -1
PBRM1-209ENST00000412587 CAMTA1Q9Y6Y1 1673 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 A0A0U1RQJ8 604 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 A0A1B0GW55 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 SAC3D1A6NKF1 404 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 NFIBO00712 420 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 GAS2O43903 313 aaKnown RBP8.79□□□□□ -1
PBRM1-209ENST00000412587 PGK2P07205 417 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4L2P0CJ85 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4L3P0CJ86 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4L4P0CJ87 422 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4L5P0CJ88 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4L6P0CJ89 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4L7P0CJ90 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 UCHL3P15374 230 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 IL10P22301 178 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 FKBP1AP62942 108 aaKnown RBP8.79□□□□□ -1
PBRM1-209ENST00000412587 VEPH1Q14D04 833 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 NTRK3Q16288 839 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 FKBP1CQ5VVH2 108 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 PCGF5Q86SE9 256 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 LRRC49Q8IUZ0 686 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 MCUQ8NE86 351 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 TOR1AIP2Q8NFQ8 470 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 FAF2Q96CS3 445 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 QKIQ96PU8 341 aaKnown RBP eCLIP8.79□□□□□ -1
PBRM1-209ENST00000412587 KCNQ5Q9NR82 932 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 DUX4Q9UBX2 424 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 GTF3C4Q9UKN8 822 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 H3BNX3 289 aa8.79□□□□□ -1
PBRM1-209ENST00000412587 PEX11AO75192 247 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms