RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ZFRQ96KR1 1074 aaKnown RBP19.85■□□□□ 0.77
TRIM56-202ENST00000412507 NACA2Q9H009 215 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 CHRDQ9H2X0 955 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 UBE2TQ9NPD8 197 aaPredicted RBP19.85■□□□□ 0.77
TRIM56-202ENST00000412507 USP3Q9Y6I4 520 aa19.85■□□□□ 0.77
TRIM56-202ENST00000412507 PIEZO1Q92508 2521 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 LAMTOR5O43504 91 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 TBX18O95935 607 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 BST2Q10589 180 aaKnown RBP19.84■□□□□ 0.77
TRIM56-202ENST00000412507 MTAPQ13126 283 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 MAN2A1Q16706 1144 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 CT47A1Q5JQC4 288 aaPredicted RBP19.84■□□□□ 0.77
TRIM56-202ENST00000412507 RAB41Q5JT25 222 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 GJB7Q6PEY0 223 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 TRIM65Q6PJ69 517 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 CCDC186Q7Z3E2 898 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 SCD5Q86SK9 330 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 MAML2Q8IZL2 1156 aaPredicted RBP19.84■□□□□ 0.77
TRIM56-202ENST00000412507 ZSWIM1Q9BR11 485 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 SAMSN1Q9NSI8 373 aaKnown RBP19.84■□□□□ 0.77
TRIM56-202ENST00000412507 NUDT5Q9UKK9 219 aa19.84■□□□□ 0.77
TRIM56-202ENST00000412507 XPO1O14980 1071 aaKnown RBP19.83■□□□□ 0.77
TRIM56-202ENST00000412507 NFATC1O95644 943 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 MBD3O95983 291 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 IRF1P10914 325 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 RARGP13631 454 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 BRD2P25440 801 aaKnown RBP19.83■□□□□ 0.77
TRIM56-202ENST00000412507 ZNF132P52740 706 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 APBA1Q02410 837 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 LRRC32Q14392 662 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 NAIF1Q69YI7 327 aaPredicted RBP19.83■□□□□ 0.77
TRIM56-202ENST00000412507 LCLAT1Q6UWP7 414 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 WBP2Q969T9 261 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 CYLDQ9NQC7 956 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRIM56-202ENST00000412507 NAGPAQ9UK23 515 aa19.83■□□□□ 0.77
TRIM56-202ENST00000412507 DMDP11532 3685 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 GTPBP10A4D1E9 387 aaKnown RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 TRDMT1O14717 391 aaKnown RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 SLC9A3R1O14745 358 aaPredicted RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 MDM4O15151 490 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 KRT5P13647 590 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 PRKCSHP14314 528 aaPredicted RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 ATP5C1P36542 298 aaKnown RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 PSEN1P49768 467 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 GALK1P51570 392 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 TKTL1P51854 596 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 AMPD2Q01433 879 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 NR1H3Q13133 447 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 CCINQ13939 588 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 GAS6Q14393 721 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 CNGA2Q16280 664 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 EXOC3L4Q17RC7 722 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 PKDCCQ504Y2 493 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 DGKKQ5KSL6 1271 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 ALYREFQ86V81 257 aaKnown RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 KIAA1958Q8N8K9 716 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 TUBGCP2Q9BSJ2 902 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 CNTN6Q9UQ52 1028 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 SH3BP1Q9Y3L3 701 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 VPS13AQ96RL7 3174 aa19.82■□□□□ 0.76
TRIM56-202ENST00000412507 ZFHX2Q9C0A1 2572 aaPredicted RBP19.82■□□□□ 0.76
TRIM56-202ENST00000412507 MYO15AQ9UKN7 3530 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 EML5Q05BV3 1969 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 E2F8A0AVK6 867 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 KCNJ18B7U540 433 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 CYP17A1P05093 508 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 SP9P0CG40 484 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 PON1P27169 355 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 PLA2G4AP47712 749 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 MFAP3P55082 362 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 CSTF1Q05048 431 aaKnown RBP19.81■□□□□ 0.76
TRIM56-202ENST00000412507 KCNJ12Q14500 433 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 ARHGAP44Q17R89 818 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 VWA3BQ502W6 1294 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 TMEM196Q5HYL7 178 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 MIIPQ5JXC2 388 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 C10orf120Q5SQS8 335 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 FSTL4Q6MZW2 842 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 SASS6Q6UVJ0 657 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 Q6ZS52 159 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 ADGRG2Q8IZP9 1017 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 NDRG1Q92597 394 aaKnown RBP19.81■□□□□ 0.76
TRIM56-202ENST00000412507 P2RY13Q9BPV8 354 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 KLF16Q9BXK1 252 aaPredicted RBP19.81■□□□□ 0.76
TRIM56-202ENST00000412507 ULBP1Q9BZM6 244 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 NDST4Q9H3R1 872 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 LRRC4Q9HBW1 653 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 FBRSL1Q9HCM7 1045 aaKnown RBP19.81■□□□□ 0.76
TRIM56-202ENST00000412507 NFE2L3Q9Y4A8 694 aa19.81■□□□□ 0.76
TRIM56-202ENST00000412507 M0QYV0 167 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 ZBED1O96006 694 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 SETSIPP0DME0 302 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 RALAP11233 206 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 NBL1P41271 181 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 RGS7P49802 495 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 ADIGQ0VDE8 80 aa19.8■□□□□ 0.76
TRIM56-202ENST00000412507 GRSF1Q12849 480 aaKnown RBP eCLIP19.8■□□□□ 0.76
TRIM56-202ENST00000412507 DHCR24Q15392 516 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms