RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 TSPAN16Q9UKR8 245 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 CNTN6Q9UQ52 1028 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 SH3BP1Q9Y3L3 701 aa17.07■□□□□ 0.32
DDR1-230ENST00000412274 ATG13O75143 517 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
DDR1-230ENST00000412274 GJA4P35212 333 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 SOX9P48436 509 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 MEA1Q16626 185 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 MAN2A1Q16706 1144 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 DPCR1Q3MIW9 517 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
DDR1-230ENST00000412274 TMEM196Q5HYL7 178 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 TRIM68Q6AZZ1 485 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
DDR1-230ENST00000412274 ADGRG2Q8IZP9 1017 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 SCML4Q8N228 414 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 SPEM1Q8N4L4 309 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 RIN3Q8TB24 985 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 KCTD13Q8WZ19 329 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 MED15Q96RN5 788 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDR1-230ENST00000412274 CFAP97Q9P2B7 532 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 DNMT3LQ9UJW3 386 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 WNT6Q9Y6F9 365 aa17.06■□□□□ 0.32
DDR1-230ENST00000412274 O00370 1275 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 MED7O43513 233 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 ADH1CP00326 375 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 SP9P0CG40 484 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 ARSAP15289 507 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 PLA2G4AP47712 749 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 ZXDBP98169 803 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 CCINQ13939 588 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 PON2Q15165 354 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 EXOC3L4Q17RC7 722 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 GOLGA7BQ2TAP0 167 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 PM20D1Q6GTS8 502 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 TXNDC11Q6PKC3 985 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 SASS6Q6UVJ0 657 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 PIGZQ86VD9 579 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 TTC30AQ86WT1 665 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 TTC8Q8TAM2 541 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 P2RY13Q9BPV8 354 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 LRRC4Q9HBW1 653 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 UBE2TQ9NPD8 197 aaPredicted RBP17.05■□□□□ 0.32
DDR1-230ENST00000412274 PRMT8Q9NR22 394 aaPredicted RBP17.05■□□□□ 0.32
DDR1-230ENST00000412274 SMPD4Q9NXE4 827 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 LSM7Q9UK45 103 aaKnown RBP17.05■□□□□ 0.32
DDR1-230ENST00000412274 ZNF510Q9Y2H8 683 aa17.05■□□□□ 0.32
DDR1-230ENST00000412274 CYP26A1O43174 497 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 PAPSS2O95340 614 aaPredicted RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 ZBED1O96006 694 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 RARGP13631 454 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 EEF1GP26641 437 aaKnown RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 EIF2DP41214 584 aaKnown RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 CXCL12P48061 93 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 COG7P83436 770 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 PDE4CQ08493 712 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 MTAPQ13126 283 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 TRIM65Q6PJ69 517 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 HTR3DQ70Z44 454 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 RRAGAQ7L523 313 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 RBBP8NLQ8NC74 664 aaPredicted RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 ENOX1Q8TC92 643 aaKnown RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 GPT2Q8TD30 523 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 CD101Q93033 1021 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 ZFRQ96KR1 1074 aaKnown RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 HSFY1Q96LI6 401 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 LINC00597Q9H2U6 94 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 OLA1Q9NTK5 396 aaKnown RBP17.04■□□□□ 0.32
DDR1-230ENST00000412274 ANO10Q9NW15 660 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 APEX2Q9UBZ4 518 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 NAGPAQ9UK23 515 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.04■□□□□ 0.32
DDR1-230ENST00000412274 PCDHGA2Q9Y5H1 932 aa17.04■□□□□ 0.32
DDR1-230ENST00000412274 A0A1W2PQH9 124 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
DDR1-230ENST00000412274 TPM2P07951 284 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 MRE11P49959 708 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 TKTL1P51854 596 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 ZNF132P52740 706 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 CSTF1Q05048 431 aaKnown RBP17.03■□□□□ 0.32
DDR1-230ENST00000412274 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 ARHGEF19Q8IW93 802 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
DDR1-230ENST00000412274 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 KLF16Q9BXK1 252 aaPredicted RBP17.03■□□□□ 0.32
DDR1-230ENST00000412274 DCLK3Q9C098 648 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 NDST4Q9H3R1 872 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 STRIP2Q9ULQ0 834 aa17.03■□□□□ 0.32
DDR1-230ENST00000412274 F5P12259 2224 aa17.02■□□□□ 0.32
DDR1-230ENST00000412274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.02■□□□□ 0.32
DDR1-230ENST00000412274 HOXA6P31267 233 aa17.02■□□□□ 0.32
DDR1-230ENST00000412274 GALK1P51570 392 aa17.02■□□□□ 0.32
DDR1-230ENST00000412274 GAD2Q05329 585 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms