RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ADAMTSL3P82987 1691 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 KIDINS220Q9ULH0 1771 aa5.43□□□□□ -1.54
HERC4-205ENST00000412272 CHD4Q14839 1912 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 LRP5O75197 1615 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ARHGEF37A1IGU5 675 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 PDE8AO60658 829 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 MICAL2O94851 1124 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 PSMG1O95456 288 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 VNN1O95497 513 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 GH2P01242 217 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 KRT7P08729 469 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ZBTB48P10074 688 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 RPS2P15880 293 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 CHN1P15882 459 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 VAMP1P23763 118 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 EEF1GP26641 437 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 EPHB2P29323 1055 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ABCG1P45844 678 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 YARSP54577 528 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 MAGOHP61326 146 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 CCNA1P78396 465 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 FOXK1P85037 733 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 XIAPP98170 497 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 AIMP1Q12904 312 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 MTHFSDQ2M296 383 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 ACSBG2Q5FVE4 666 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 RWDD4Q6NW29 188 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 SLC16A12Q6ZSM3 486 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ATAD1Q8NBU5 361 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ZNF540Q8NDQ6 660 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 MAGOHBQ96A72 148 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 ALKBH8Q96BT7 664 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 GMCL1Q96IK5 515 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 RHOBTB2Q9BYZ6 727 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 MKRN2Q9H000 416 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 KLHL25Q9H0H3 589 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 PABPC3Q9H361 631 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 ERVMER34-1Q9H9K5 563 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 MCCC2Q9HCC0 563 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 NUP50Q9UKX7 468 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 NOVA2Q9UNW9 492 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 EMSYQ7Z589 1322 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 TOR1AO14656 332 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 RASGRP1O95267 797 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 BAG2O95816 211 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ATF4P18848 351 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 JAK1P23458 1154 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 TRHRP34981 398 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 FCHO2Q0JRZ9 810 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 SGCGQ13326 291 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 USP41Q3LFD5 358 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 TPGS2Q68CL5 300 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 EPM2AIP1Q7L775 607 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 ZNF589Q86UQ0 364 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 C2CD5Q86YS7 1000 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 SLC22A9Q8IVM8 553 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 CLIP4Q8N3C7 705 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 OR2W6PQ8NHA6 318 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 KCTD4Q8WVF5 259 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 RASSF5Q8WWW0 418 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 FEM1CQ96JP0 617 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 NUP88Q99567 741 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 ZKSCAN3Q9BRR0 538 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 NTMT1Q9BV86 223 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 SLC2A11Q9BYW1 496 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 NHEJ1Q9H9Q4 299 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 C17orf75Q9HAS0 396 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 GNPTGQ9UJJ9 305 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 SIK3Q9Y2K2 1263 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 EID1Q9Y6B2 187 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 RIMS1Q86UR5 1692 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 NRCAMQ92823 1304 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 TTC26A0AVF1 554 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 PRSS44E7EML9 344 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 MAGEB2O15479 319 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 GTPBP6O43824 516 aaPredicted RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 DNAJC6O75061 913 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 PTP4A3O75365 173 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 MYO1DO94832 1006 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 HSMCR30P0CW71 290 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 CD44P16070 742 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 CTNNA1P35221 906 aaKnown RBP5.42□□□□□ -1.54
HERC4-205ENST00000412272 ZNF76P36508 570 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 NR4A2P43354 598 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 CASP5P51878 434 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ERVK-21P61565 698 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 TNNC1P63316 161 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 TFDP1Q14186 410 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 OXA1LQ15070 435 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 CNGA2Q16280 664 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 DUSP7Q16829 419 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 GTDC1Q4AE62 458 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 VWA5B1Q5TIE3 1220 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 KLHDC7AQ5VTJ3 777 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 AGAP7PQ5VUJ5 663 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 CYP20A1Q6UW02 462 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 RIC3Q7Z5B4 369 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 ADGRG6Q86SQ4 1221 aa5.42□□□□□ -1.54
HERC4-205ENST00000412272 FBXO11Q86XK2 927 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms