RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SCGB3A2Q96PL1 93 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FBRSL1Q9HCM7 1045 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF224Q9NZL3 707 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ABCD2Q9UBJ2 740 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLC24A2Q9UI40 661 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 IFT52Q9Y366 437 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PRPSAP2O60256 369 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GSTM1P09488 218 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 HOXC12P31275 282 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 CHI3L1P36222 383 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLC39A6Q13433 755 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DCST2Q5T1A1 773 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TRIM48Q8IWZ4 208 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GUF1Q8N442 669 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GALNT6Q8NCL4 622 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SPATA9Q9BWV2 254 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 EMILIN2Q9BXX0 1053 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SIK2Q9H0K1 926 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 MRPL44Q9H9J2 332 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DNAAF2Q9NVR5 837 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 AP3M1Q9Y2T2 418 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ANO9A1A5B4 782 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RRN3P2A6NIE6 340 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 KIAA1324LA8MWY0 1029 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FOXP2O15409 715 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 HS6ST1O60243 411 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 REM1O75628 298 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TOP3BO95985 862 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SERPIND1P05546 499 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GGCXP38435 758 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 LIG4P49917 911 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLC10A7Q0GE19 358 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 LCP2Q13094 533 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 CALCRLQ16602 461 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PLEKHG4Q58EX7 1191 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FAM160B1Q5W0V3 765 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SMIM15Q7Z3B0 74 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PDZD9Q8IXQ8 264 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 USP38Q8NB14 1042 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TBC1D15Q8TC07 691 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 U2AF1L4Q8WU68 220 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TRAPPC12Q8WVT3 735 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF560Q96MR9 790 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ERMAPQ96PL5 475 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 NACC1Q96RE7 527 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TIPINQ9BVW5 301 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RC3H2Q9HBD1 1191 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TBC1D13Q9NVG8 400 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 WDR19Q8NEZ3 1342 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 HHLA1C9JL84 531 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZSCAN22P10073 491 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 KELP23276 732 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 MYL9P24844 172 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 KCNK10P57789 538 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TYSND1Q2T9J0 566 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 HLA-DQA1Q5Y7H0 255 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF550Q7Z398 422 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 S100A7AQ86SG5 101 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 MAPKAPK5Q8IW41 473 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 THEM5Q8N1Q8 247 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SLC4A11Q8NBS3 891 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 REPS2Q8NFH8 660 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GTF2H4Q92759 462 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 REXO5Q96IC2 774 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TUBGCP5Q96RT8 1024 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SEPT5Q99719 369 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 CDC6Q99741 560 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RBCK1Q9BYM8 510 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 INTS2Q9H0H0 1204 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 LRRC4Q9HBW1 653 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ATAD2BQ9ULI0 1458 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 NCKAP5LQ9HCH0 1330 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 IFNA21P01568 189 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ERVK-10P10266 1014 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ATP1A3P13637 1013 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 OGNP20774 298 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GALK2Q01415 458 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TCEA2Q15560 299 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 DLG2Q15700 870 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 FAM122CQ6P4D5 195 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 QSOX2Q6ZRP7 698 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 MYCT1Q8N699 235 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF655Q8N720 491 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 MLKLQ8NB16 471 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RDM1Q8NG50 284 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 NEK9Q8TD19 979 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ART5Q96L15 291 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 WDR41Q9HAD4 459 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 ZFATQ9P243 1243 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 EXOGQ9Y2C4 368 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 OTOL1A6NHN0 477 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 TMEM114B3SHH9 223 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 M0R036 132 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 RGS14O43566 566 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 GCNT3O95395 438 aa4.72□□□□□ -1.65
PTPN13-202ENST00000411767 SNRPA1P09661 255 aaKnown RBP4.72□□□□□ -1.65
PTPN13-202ENST00000411767 NQO1P15559 274 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms