RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ABCG4Q9H172 646 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 WDR41Q9HAD4 459 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 SH3BGRLO75368 114 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ALBP02768 609 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 HIST1H2ABP04908 130 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 JAK1P23458 1154 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 SPRP35270 261 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 THOP1P52888 689 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 TTC23Q5W5X9 447 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PACS1Q6VY07 963 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 HIST3H2AQ7L7L0 130 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 OR8H2Q8N162 312 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 HIST1H2ACQ93077 130 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 SPG21Q9NZD8 308 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 UVRAGQ9P2Y5 699 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 M0R3G1 203 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 EYA4O95677 639 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 KLC1Q07866 573 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 XRCC4Q13426 336 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 KYNUQ16719 465 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 COLGALT2Q8IYK4 626 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ATL2Q8NHH9 583 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 RBBP8Q99708 897 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 HOXA2O43364 376 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 USP1O94782 785 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 OXCT1P55809 520 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 STILQ15468 1287 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 SGF29Q96ES7 293 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 REXO5Q96IC2 774 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 FRMD6Q96NE9 622 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ISCA1Q9BUE6 129 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 GBA2Q9HCG7 927 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ABCA6Q8N139 1617 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 RIMS1Q86UR5 1692 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 SMIM31A0A1B0GVY4 71 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 TBC1D3BA6NDS4 549 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 XPO1O14980 1071 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 FGRP09769 529 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 CAMK1Q14012 370 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PTGISQ16647 500 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 CASP10Q92851 521 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 GLMNQ92990 594 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 IGSF9BQ9UPX0 1349 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 EXTL3O43909 919 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ACO1P21399 889 aaKnown RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PPP2R1BP30154 601 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 IL2P60568 153 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF669Q96BR6 464 aaPredicted RBP11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 TIPINQ9BVW5 301 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 RMND5AQ9H871 391 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 TRPM5Q9NZQ8 1165 aa11.59□□□□□ -0.55
PRPF40A-202ENST00000410080 ZNF185O15231 689 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 HS6ST1O60243 411 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 IFNA16P05015 189 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 TRIM25Q14258 630 aaKnown RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 DGKKQ5KSL6 1271 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ACOT1Q86TX2 421 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 C19orf18Q8NEA5 215 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 CYFIP2Q96F07 1278 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 LBPP18428 481 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 RFC5P40937 340 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 CHI3L2Q15782 390 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 C12orf60Q5U649 245 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 DSG4Q86SJ6 1040 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 SH3GL3Q99963 347 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 PRMT7Q9NVM4 692 aaPredicted RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 GLRBP48167 497 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 DEFA1P59665 94 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 DEFA3P59666 94 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 RHOAP61586 193 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ALG11Q2TAA5 492 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 C4orf33Q8N1A6 199 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 RHOBTB2Q9BYZ6 727 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 FOXP3Q9BZS1 431 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 PDGFDQ9GZP0 370 aaPredicted RBP11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 DIABLOQ9NR28 239 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNHIT2Q9UHR6 403 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 GPSM3Q9Y4H4 160 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 KRT75O95678 551 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 FAAH2Q6GMR7 532 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 TFAP2DQ7Z6R9 452 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 LONP2Q86WA8 852 aa11.58□□□□□ -0.56
PRPF40A-202ENST00000410080 CCDC185Q8N715 623 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms