RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 FAM96AQ9H5X1 160 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 RNF19AQ9NV58 838 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 ZC3H7BQ9UGR2 993 aaKnown RBP15.58■□□□□ 0.08
TTC7A-204ENST00000409825 PLCH1Q4KWH8 1693 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 SYN3O14994 580 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 ATP1A1P05023 1023 aaKnown RBP15.58■□□□□ 0.08
TTC7A-204ENST00000409825 TFDP3Q5H9I0 405 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 ANKRD52Q8NB46 1076 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 SPATA4Q8NEY3 305 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 ARNTL2Q8WYA1 636 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 MYLPFQ96A32 169 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 DUSP9Q99956 384 aaKnown RBP15.58■□□□□ 0.08
TTC7A-204ENST00000409825 AIPL1Q9NZN9 384 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 ARHGAP28Q9P2N2 729 aa15.58■□□□□ 0.08
TTC7A-204ENST00000409825 CHORDC1Q9UHD1 332 aaPredicted RBP15.58■□□□□ 0.08
TTC7A-204ENST00000409825 TSPAN1O60635 241 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 USP17L7P0C7H9 530 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 BRCC3P46736 316 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 GNGT1P63211 74 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 IRX4P78413 519 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 ZRANB3Q5FWF4 1079 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 MARC1Q5VT66 337 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 FOXR2Q6PJQ5 311 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 ZSWIM1Q9BR11 485 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 C1QTNF7Q9BXJ2 289 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 VCXQ9H320 206 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 AMACRQ9UHK6 382 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 F8VP50 259 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 SUN1O94901 812 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 TNFSF9P41273 254 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 TUBP50607 506 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 CASP5P51878 434 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 SGCGQ13326 291 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 MTFR1Q15390 333 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 ERMARDQ5T6L9 678 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 MCOLN2Q8IZK6 566 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 LENG9Q96B70 501 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 SCLYQ96I15 445 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 PCDH8O95206 1070 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 IGSF6O95976 241 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 ADRB2P07550 413 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 SERPINF2P08697 491 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 ACRP10323 421 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 COL6A1P12109 1028 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 PMS1P54277 932 aaKnown RBP15.57■□□□□ 0.08
TTC7A-204ENST00000409825 PMS2P54278 862 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 PPP3CAQ08209 521 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 C9orf57Q5W0N0 161 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 KCTD16Q68DU8 428 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 TPCN2Q8NHX9 752 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.57■□□□□ 0.082e-7■■■■■ 61.1
TTC7A-204ENST00000409825 SLC13A4Q9UKG4 626 aa15.57■□□□□ 0.08
TTC7A-204ENST00000409825 RASA4BC9J798 803 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 RASA4O43374 803 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 C22orf31O95567 290 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ARHGEF19Q8IW93 802 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 NID2Q14112 1375 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 TSPAN3O60637 253 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ZNF200P98182 395 aaPredicted RBP15.56■□□□□ 0.08
TTC7A-204ENST00000409825 FNDC3BQ53EP0 1204 aaKnown RBP15.56■□□□□ 0.08
TTC7A-204ENST00000409825 C2CD6Q53TS8 623 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 MRNIPQ6NTE8 343 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 RAD9BQ6WBX8 426 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 WDR75Q8IWA0 830 aaKnown RBP15.56■□□□□ 0.08
TTC7A-204ENST00000409825 SCUBE3Q8IX30 993 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 KIRREL3Q8IZU9 778 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ZNF784Q8NCA9 323 aaPredicted RBP15.56■□□□□ 0.08
TTC7A-204ENST00000409825 PARD6BQ9BYG5 372 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 PRDM16Q9HAZ2 1276 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ITGALP20701 1170 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 PLA2G4AP47712 749 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 OCRLQ01968 901 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 WNT8BQ93098 351 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 XPO7Q9UIA9 1087 aaKnown RBP15.56■□□□□ 0.08
TTC7A-204ENST00000409825 CDY1Q9Y6F8 540 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ZNF862O60290 1169 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 PHEXP78562 749 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 SPARCL1Q14515 664 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 EXD1Q8NHP7 514 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 SLC20A1Q8WUM9 679 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 CAPS2Q9BXY5 557 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 GABRQQ9UN88 632 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ZNF510Q9Y2H8 683 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 ASTN1O14525 1302 aa15.56■□□□□ 0.08
TTC7A-204ENST00000409825 A0A0A6YYK5 440 aaPredicted RBP15.55■□□□□ 0.08
TTC7A-204ENST00000409825 PIGZQ86VD9 579 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 SPATA16Q9BXB7 569 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 AVENQ9NQS1 362 aaPredicted RBP15.55■□□□□ 0.08
TTC7A-204ENST00000409825 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.55■□□□□ 0.08
TTC7A-204ENST00000409825 GLI3P10071 1580 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 HSPA1AP0DMV8 641 aaKnown RBP15.55■□□□□ 0.08
TTC7A-204ENST00000409825 HSPA1BP0DMV9 641 aaKnown RBP15.55■□□□□ 0.08
TTC7A-204ENST00000409825 GABRR2P28476 465 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 SERPINB9P50453 376 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 SLC13A5Q86YT5 568 aaPredicted RBP15.55■□□□□ 0.08
TTC7A-204ENST00000409825 HS6ST3Q8IZP7 471 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 CCNYL1Q8N7R7 359 aa15.55■□□□□ 0.08
TTC7A-204ENST00000409825 C3orf20Q8ND61 904 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms