RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CNGB3Q9NQW8 809 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 UVRAGQ9P2Y5 699 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 NAALADL1Q9UQQ1 740 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 GOLGA6L9A6NEM1 432 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 TMEM191CA6NGB0 347 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 CCL16O15467 120 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 NCK2O43639 380 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 PDGFRAP16234 1089 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 SNX16P57768 344 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 YWHAZP63104 245 aaKnown RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 PITX1P78337 314 aaPredicted RBP13.2□□□□□ -0.3
PMS1-204ENST00000409823 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 BHLHA9Q7RTU4 235 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 GPR65Q8IYL9 337 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 RXFP2Q8WXD0 754 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 PSMB7Q99436 277 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 OSER1Q9NX31 292 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 GMIPQ9P107 970 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 TMEM59LQ9UK28 342 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 USP3Q9Y6I4 520 aa13.2□□□□□ -0.3
PMS1-204ENST00000409823 A0A0A6YYK5 440 aaPredicted RBP13.19□□□□□ -0.3
PMS1-204ENST00000409823 A0A1W2PQH9 124 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 NCAM1P13591 858 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 YWHAQP27348 245 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
PMS1-204ENST00000409823 PLD1Q13393 1074 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 GRIN2CQ14957 1233 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 LRIT3Q3SXY7 679 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 NYAP1Q6ZVC0 841 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 DEFB106AQ8N104 65 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 FBXO32Q969P5 355 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 BTNL10A8MVZ5 291 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 CAPN9O14815 690 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 FYNP06241 537 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 TCF4P15884 667 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 PSMA2P25787 234 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
PMS1-204ENST00000409823 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
PMS1-204ENST00000409823 C12orf76Q8N812 135 aaPredicted RBP13.19□□□□□ -0.3
PMS1-204ENST00000409823 APOL5Q9BWW9 433 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 CYLDQ9NQC7 956 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 A0A0C4DFX4 3053 aa13.19□□□□□ -0.3
PMS1-204ENST00000409823 TBX18O95935 607 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 LRG1P02750 347 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 PM20D1Q6GTS8 502 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 SCD5Q86SK9 330 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 ZDHHC17Q8IUH5 632 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 RNF10Q8N5U6 811 aaKnown RBP13.18□□□□□ -0.3
PMS1-204ENST00000409823 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 SPATA17Q96L03 361 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 ZNF512Q96ME7 567 aaPredicted RBP13.18□□□□□ -0.3
PMS1-204ENST00000409823 HCFC1R1Q9NWW0 138 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 CALCOCO1Q9P1Z2 691 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 ALG6Q9Y672 507 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 C2CD4BA6NLJ0 364 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 FBXO21O94952 628 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 LTFP02788 710 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 HMGA1P17096 107 aaKnown RBP13.18□□□□□ -0.3
PMS1-204ENST00000409823 COMTP21964 271 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 GJC1P36383 396 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 EPHB3P54753 998 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
PMS1-204ENST00000409823 EFHC1Q5JVL4 640 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 MRPL38Q96DV4 380 aaKnown RBP13.18□□□□□ -0.3
PMS1-204ENST00000409823 ALS2CR12Q96Q35 445 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
PMS1-204ENST00000409823 HSF2BPO75031 334 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 GSCP56915 257 aaPredicted RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 TRIM58Q8NG06 486 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 POPDC2Q9HBU9 364 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 MDM4O15151 490 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 SPOPO43791 374 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 GJA1P17302 382 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 GPD1P21695 349 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 IGFBP4P22692 258 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 ETF1P62495 437 aaKnown RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 NME3Q13232 169 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 DNTTIP2Q5QJE6 756 aaKnown RBP13.17□□□□□ -0.3
PMS1-204ENST00000409823 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
PMS1-204ENST00000409823 MICALL1Q8N3F8 863 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms