RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SV2AQ7L0J3 742 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MAEAQ7L5Y9 396 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TPH2Q8IWU9 490 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MARVELD2Q8N4S9 558 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SLC7A14Q8TBB6 771 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 FEZF2Q8TBJ5 459 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TCP10LQ8TDR4 215 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CLEC4DQ8WXI8 215 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 USP6NLQ92738 828 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SERAC1Q96JX3 654 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 OLFM3Q96PB7 478 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TUBGCP5Q96RT8 1024 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PAFAH2Q99487 392 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TSSK1BQ9BXA7 367 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SLC2A11Q9BYW1 496 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SLC6A16Q9GZN6 736 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MAF1Q9H063 256 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CCDC113Q9H0I3 377 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MRPL47Q9HD33 250 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 NPHS2Q9NP85 383 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SLC17A7Q9P2U7 560 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 HEY2Q9UBP5 337 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PGAP2Q9UHJ9 254 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TAGLN3Q9UI15 199 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 VPS28Q9UK41 221 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DOLKQ9UPQ8 538 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 EXOC7Q9UPT5 735 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TMX2Q9Y320 296 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TTLL3Q9Y4R7 772 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 NR2E3Q9Y5X4 410 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 WASF2Q9Y6W5 498 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PLXNA1Q9UIW2 1896 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SF3B1O75533 1304 aaKnown RBP eCLIP3.28□□□□□ -1.888e-6■■■■■ 107
CUL3-204ENST00000409777 A0A1B0GVG6 124 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARHGEF35A5YM69 484 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TRIM64CA6NLI5 447 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 IPO5O00410 1097 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 VILLO15195 856 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GAS7O60861 476 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 RFPL1O75677 317 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 DGAT1O75907 488 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 STK10O94804 968 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 TMEM63AO94886 807 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SERPINA6P08185 405 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 POLR2MP0CAP2 368 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TCF4P15884 667 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ATF4P18848 351 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 KRT15P19012 456 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CA4P22748 312 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SERPINB3P29508 390 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PEX19P40855 299 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CSRP3P50461 194 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARFIP2P53365 341 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MRPS5P82675 430 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 PDIA2Q13087 525 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 SNAPC2Q13487 334 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 LAMB3Q13751 1172 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 CCNIQ14094 377 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 EFTUD2Q15029 972 aaKnown RBP eCLIP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ADRM1Q16186 407 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GNPTABQ3T906 1256 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 BRDTQ58F21 947 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 TFDP3Q5H9I0 405 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 HHATQ5VTY9 493 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TRIM68Q6AZZ1 485 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MFSD7Q6UXD7 560 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 NSMFQ6X4W1 530 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 RIPOR1Q6ZS17 1223 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZNF365Q70YC5 407 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARCQ7LC44 396 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ULK2Q8IYT8 1036 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 C4orf33Q8N1A6 199 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARHGAP24Q8N264 748 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 LRRC43Q8N309 656 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ARFGAP1Q8N6T3 406 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 RBM15BQ8NDT2 890 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 FBXO27Q8NI29 283 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 PIP4K2CQ8TBX8 421 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 NAT14Q8WUY8 206 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 BSNDQ8WZ55 320 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ISL2Q96A47 359 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 COL26A1Q96A83 441 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PRICKLE1Q96MT3 831 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 FRMD8Q9BZ67 464 aaPredicted RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 TRIM4Q9C037 500 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 UBE2OQ9C0C9 1292 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZNF518BQ9C0D4 1074 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 ZNF696Q9H7X3 374 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 EHMT1Q9H9B1 1298 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 APOBEC3GQ9HC16 384 aaKnown RBP3.28□□□□□ -1.88
CUL3-204ENST00000409777 S100A14Q9HCY8 104 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PARVAQ9NVD7 372 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PTTG2Q9NZH5 202 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 TBK1Q9UHD2 729 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 SLC7A8Q9UHI5 535 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 GTF2IRD1Q9UHL9 959 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 PLLPQ9Y342 182 aa3.28□□□□□ -1.88
CUL3-204ENST00000409777 MAP4K5Q9Y4K4 846 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms