RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 KSR2Q6VAB6 950 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 SFTPA1Q8IWL2 248 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 VGLL2Q8N8G2 317 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 ASB2Q96Q27 587 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 AS3MTQ9HBK9 375 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 FLRT1Q9NZU1 646 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 UBE2Q2LH0YL09 131 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 SPRY2O43597 315 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 GCATO75600 419 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 A1BGP04217 495 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 EPHB2P29323 1055 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 PRIM2P49643 509 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 COPB1P53618 953 aaKnown RBP4.92□□□□□ -1.62
PMS1-203ENST00000409593 ZNF543Q08ER8 600 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 LMAN2Q12907 356 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 IFIT5Q13325 482 aaKnown RBP4.92□□□□□ -1.62
PMS1-203ENST00000409593 EZH2Q15910 746 aaKnown RBP4.92□□□□□ -1.62
PMS1-203ENST00000409593 MANEALQ5VSG8 457 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 ZNF66Q6ZN08 573 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 WDYHV1Q96HA8 205 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 TBCBQ99426 244 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 SH2D3AQ9BRG2 576 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 ZCWPW1Q9H0M4 648 aa4.92□□□□□ -1.62
PMS1-203ENST00000409593 PRRT4C9JH25 899 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 POC1B-GALNT4F8VUJ3 575 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 M0R3H8 397 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 TMPRSS11DO60235 418 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 USP1O94782 785 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 SLC5A1P13866 664 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 TRIM27P14373 513 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 CD19P15391 556 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 RBL1P28749 1068 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 GNALP38405 381 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 STT3AP46977 705 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 DIO1P49895 249 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 USP49Q70CQ1 688 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 FSTL5Q8N475 847 aaPredicted RBP4.91□□□□□ -1.62
PMS1-203ENST00000409593 GALNT4Q8N4A0 578 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 METTL25Q8N6Q8 603 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 RITA1Q96K30 269 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 SLC25A32Q9H2D1 315 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 MGAT4CQ9UBM8 478 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 NKX1-2Q9UD57 310 aaPredicted RBP4.91□□□□□ -1.62
PMS1-203ENST00000409593 RGS17Q9UGC6 210 aaPredicted RBP4.91□□□□□ -1.62
PMS1-203ENST00000409593 STEAP1Q9UHE8 339 aa4.91□□□□□ -1.62
PMS1-203ENST00000409593 CELA2AP08217 269 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 CDK4P11802 303 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 TSHRP16473 764 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 CASP5P51878 434 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 FAM187BQ17R55 369 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 KIAA1614Q5VZ46 1190 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 BCDIN3DQ7Z5W3 292 aaKnown RBP4.9□□□□□ -1.62
PMS1-203ENST00000409593 ATP11CQ8NB49 1132 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 NGDNQ8NEJ9 315 aaKnown RBP4.9□□□□□ -1.62
PMS1-203ENST00000409593 CTHRC1Q96CG8 243 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 C5orf34Q96MH7 638 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 HS6ST2Q96MM7 605 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 FYTTD1Q96QD9 318 aaKnown RBP4.9□□□□□ -1.62
PMS1-203ENST00000409593 TRIM36Q9NQ86 728 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 SLC27A6Q9Y2P4 619 aa4.9□□□□□ -1.62
PMS1-203ENST00000409593 CHRM5P08912 532 aaPredicted RBP4.89□□□□□ -1.63
PMS1-203ENST00000409593 NBPF7P0C2Y1 421 aaPredicted RBP4.89□□□□□ -1.63
PMS1-203ENST00000409593 PHKG2P15735 406 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 FGFR2P21802 821 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CERS1P27544 350 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 ATICP31939 592 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 EIF4A1P60842 406 aaKnown RBP4.89□□□□□ -1.63
PMS1-203ENST00000409593 ST3GAL2Q16842 350 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CEP78Q5JTW2 689 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CRTC1Q6UUV9 634 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 YTHDF3Q7Z739 585 aaKnown RBP4.89□□□□□ -1.63
PMS1-203ENST00000409593 P3H2Q8IVL5 708 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 PJA1Q8NG27 643 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 MAFAQ8NHW3 353 aaPredicted RBP4.89□□□□□ -1.63
PMS1-203ENST00000409593 VPS50Q96JG6 964 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CCDC17Q96LX7 622 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 GJB4Q9NTQ9 266 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 ASIC5Q9NY37 505 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 VPS51Q9UID3 782 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 ASAP1Q9ULH1 1129 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CAPN11Q9UMQ6 739 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 DNAJC9-AS1A6NH13 148 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 APOL1O14791 398 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 PRR35P0CG20 571 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 MCM5P33992 734 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 AWAT1Q58HT5 328 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 TMEM65Q6PI78 240 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CNGA4Q8IV77 575 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 CCDC150Q8NCX0 1101 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 SLC29A3Q9BZD2 475 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 NRIP3Q9NQ35 241 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 PDGFCQ9NRA1 345 aa4.89□□□□□ -1.63
PMS1-203ENST00000409593 A0A087WZ62 844 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 TCRBV5S1A1TA0A578 114 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 A8MVJ9 347 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 TMEM232C9JQI7 657 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 PPP6CO00743 305 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 LATS1O95835 1130 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 MT-CO3P00414 261 aa4.88□□□□□ -1.63
PMS1-203ENST00000409593 KRT18P05783 430 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms