RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 ARHGAP18Q8N392 663 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 WDTC1Q8N5D0 677 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 NUP58Q9BVL2 599 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 SLC4A5Q9BY07 1137 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 EDEM3Q9BZQ6 932 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 RNF38Q9H0F5 515 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 SMOC2Q9H3U7 446 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 CCSER2Q9H7U1 834 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 OSER1Q9NX31 292 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 CLIC5Q9NZA1 410 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 NOCTQ9UK39 431 aaKnown RBP21.34■■□□□ 1.01
PTCD3-202ENST00000409326 ARHGAP26Q9UNA1 814 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 CCL26Q9Y258 94 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 CEP83Q9Y592 693 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 COL4A2P08572 1712 aa21.34■■□□□ 1.01
PTCD3-202ENST00000409326 PI4K2BG5E9Z4 385 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 COCHO43405 550 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 NARSO43776 548 aaKnown RBP21.33■■□□□ 1.01
PTCD3-202ENST00000409326 TLR5O60602 858 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 FBXO21O94952 628 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 SRFP11831 508 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 CDH5P33151 784 aaPredicted RBP21.33■■□□□ 1.01
PTCD3-202ENST00000409326 DAOAP59103 153 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 ZXDAP98168 799 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 PDCLQ13371 301 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 TAF3Q5VWG9 929 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 C1orf131Q8NDD1 294 aaKnown RBP21.33■■□□□ 1.01
PTCD3-202ENST00000409326 ANP32EQ9BTT0 268 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 RBSNQ9H1K0 784 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 PDCL3Q9H2J4 239 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 ST7Q9NRC1 585 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.33■■□□□ 1.01
PTCD3-202ENST00000409326 NAGPAQ9UK23 515 aa21.33■■□□□ 1.01
PTCD3-202ENST00000409326 ITIH6Q6UXX5 1313 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 TECTAO75443 2155 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 PIK3R2O00459 728 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 DLL1O00548 723 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 RARGP13631 454 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 TCF3P15923 654 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 FERP16591 822 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 YWHAGP61981 247 aaKnown RBP eCLIP21.32■■□□□ 1
PTCD3-202ENST00000409326 CDR2Q01850 454 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 FCHO2Q0JRZ9 810 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 USP4Q13107 963 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 GRM2Q14416 872 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 TMEM110Q86TL2 294 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 GAS2L3Q86XJ1 694 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 ZNF276Q8N554 614 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 BPIFB1Q8TDL5 484 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 SLC20A1Q8WUM9 679 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 IRGQQ8WZA9 623 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 EDAQ92838 391 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 IQCDQ96DY2 449 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 LRRC3BQ96PB8 259 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 NOX5Q96PH1 765 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 TRMT61BQ9BVS5 477 aaKnown RBP21.32■■□□□ 1
PTCD3-202ENST00000409326 SLC2A4RGQ9NR83 387 aa21.32■■□□□ 1
PTCD3-202ENST00000409326 A0A1W2PQJ5 194 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 LRRC53A6NM62 1247 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 E5RJQ4 531 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 LSM8O95777 96 aaKnown RBP21.31■■□□□ 1
PTCD3-202ENST00000409326 MMEP08473 750 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 CCDC172P0C7W6 258 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 MBL2P11226 248 aaPredicted RBP21.31■■□□□ 1
PTCD3-202ENST00000409326 RALAP11233 206 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 ZNF77Q15935 545 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 KLHDC10Q6PID8 442 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 SARM1Q6SZW1 724 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 TADA2BQ86TJ2 420 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 TMEM35BQ8NCS4 154 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 RIN3Q8TB24 985 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 NDRG1Q92597 394 aaKnown RBP21.31■■□□□ 1
PTCD3-202ENST00000409326 CPXM1Q96SM3 734 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 CDK5RAP1Q96SZ6 601 aaKnown RBP21.31■■□□□ 1
PTCD3-202ENST00000409326 NACA2Q9H009 215 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 CPQQ9Y646 472 aa21.31■■□□□ 1
PTCD3-202ENST00000409326 YJEFN3A6XGL0 299 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 E7ENQ6 273 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 ATP5C1P36542 298 aaKnown RBP21.3■■□□□ 1
PTCD3-202ENST00000409326 GPC5P78333 572 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 ZXDBP98169 803 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 FMO1Q01740 532 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 ARID5AQ03989 594 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 YAF2Q8IY57 180 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 SH3RF2Q8TEC5 729 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 CLEC4CQ8WTT0 213 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 PPP1R13BQ96KQ4 1090 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 MIS12Q9H081 205 aa21.3■■□□□ 1
PTCD3-202ENST00000409326 PAPSS1O43252 624 aaPredicted RBP21.29■■□□□ 1
PTCD3-202ENST00000409326 SART1O43290 800 aaKnown RBP21.29■■□□□ 1
PTCD3-202ENST00000409326 TBX18O95935 607 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 CHRNB2P17787 502 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 GDI1P31150 447 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 SIGLEC14Q08ET2 396 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 PTPN20Q4JDL3 420 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 ARHGAP29Q52LW3 1261 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 IRF2BP2Q7Z5L9 587 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 DDX42Q86XP3 938 aaKnown RBP eCLIP21.29■■□□□ 1
PTCD3-202ENST00000409326 SCUBE3Q8IX30 993 aa21.29■■□□□ 1
PTCD3-202ENST00000409326 ZFRQ96KR1 1074 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms