RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CHPFQ8IZ52 775 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 ZSWIM2Q8NEG5 633 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 POMGNT1Q8WZA1 660 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 OTUB2Q96DC9 234 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 GABRG3Q99928 467 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 PRDM16Q9HAZ2 1276 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 SPHK2Q9NRA0 654 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 NFE2L3Q9Y4A8 694 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 RAI2Q9Y5P3 530 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 RAD54BQ9Y620 910 aa13.7□□□□□ -0.22
CHRNA1-203ENST00000409219 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 GOLGA8CPA6NN73 597 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 F8VP50 259 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 FLRT2O43155 660 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 CD6P30203 668 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ABCD1P33897 745 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 MATKP42679 507 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 TAF10Q12962 218 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ANO4Q32M45 955 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 PREPLQ4J6C6 727 aaPredicted RBP13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 NUDT18Q6ZVK8 323 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ZNF605Q86T29 641 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 BBS7Q8IWZ6 715 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ZNF843Q8N446 348 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 CSGALNACT2Q8N6G5 542 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 RHBDD1Q8TEB9 315 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 CDC6Q99741 560 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ANP32EQ9BTT0 268 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ZHX3Q9H4I2 956 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 PRORYQ9H606 182 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 TMEM30AQ9NV96 361 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 EHD2Q9NZN4 543 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 CDH9Q9ULB4 789 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 BTBD3Q9Y2F9 522 aa13.69□□□□□ -0.22
CHRNA1-203ENST00000409219 VWA3AA6NCI4 1184 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 TRIM66O15016 1216 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 COCHO43405 550 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 KRT19P08727 400 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 NEK4P51957 841 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 CACNA2D1P54289 1103 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 SMAD1Q15797 465 aaKnown RBP13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 GRAMD4Q6IC98 578 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 KIAA1324Q6UXG2 1013 aaKnown RBP13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 LIMS2Q7Z4I7 341 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 TMEM25Q86YD3 366 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 WBP2Q969T9 261 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 TOE1Q96GM8 510 aaKnown RBP13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 C8orf48Q96LL4 319 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 FAM213AQ9BRX8 229 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 MTMR12Q9C0I1 747 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 MIR1-1HGQ9H1L0 117 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 ST6GALNAC4Q9H4F1 302 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 PCDHGB2Q9Y5G2 931 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 KNTC1P50748 2209 aa13.68□□□□□ -0.22
CHRNA1-203ENST00000409219 PRRT4C9JH25 899 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 TBCAO75347 108 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 NCAM1P13591 858 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 IFRD2Q12894 506 aaPredicted RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 MAPRE1Q15691 268 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 HLA-BQ31612 363 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 SDE2Q6IQ49 451 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 SAAL1Q96ER3 474 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 DUSP9Q99956 384 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 GPR174Q9BXC1 333 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 DNAJC17Q9NVM6 304 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 USP36Q9P275 1121 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 SH3BP1Q9Y3L3 701 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 MYO18BQ8IUG5 2567 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 ATMQ13315 3056 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 PPP1R37O75864 691 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 MCM6Q14566 821 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 POSTNQ15063 836 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 PTPRNQ16849 979 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 DCAF12L1Q5VU92 463 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 LSM14AQ8ND56 463 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 CACTINQ8WUQ7 758 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 FCRL3Q96P31 734 aaPredicted RBP13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
CHRNA1-203ENST00000409219 RBAKQ9NYW8 714 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms