RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TKTL1P51854 596 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 CDKAL1Q5VV42 579 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 DDX42Q86XP3 938 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 ZSWIM1Q9BR11 485 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 LINC00597Q9H2U6 94 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 NMUR1Q9HB89 426 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 LRRC4Q9HBW1 653 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 OSER1Q9NX31 292 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 TAB2Q9NYJ8 693 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 DLGAP2Q9P1A6 1054 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 NAGPAQ9UK23 515 aa18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDLIM2-206ENST00000409141 TBX18O95935 607 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 TPM2P07951 284 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 RARGP13631 454 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 CTHP32929 405 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 ATP5C1P36542 298 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 PSEN1P49768 467 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 MYL5Q02045 173 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 PKDCCQ504Y2 493 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 SCD5Q86SK9 330 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 CPA6Q8N4T0 437 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 ATP2A3Q93084 1043 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 SIX2Q9NPC8 291 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 CYLDQ9NQC7 956 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 DNAJC12Q9UKB3 198 aa18.88■□□□□ 0.61
PDLIM2-206ENST00000409141 OTOL1A6NHN0 477 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 M0QYV0 167 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 ZBED1O96006 694 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 RALAP11233 206 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 PLA2G4AP47712 749 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 PTPN5P54829 565 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 TCF15Q12870 199 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 KRT31Q15323 416 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 EML3Q32P44 896 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 TXNDC11Q6PKC3 985 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 ARHGAP18Q8N392 663 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 SECISBP2LQ93073 1101 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 CLDN23Q96B33 292 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 ZFRQ96KR1 1074 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 NAT10Q9H0A0 1025 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 VPS16Q9H269 839 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 ECT2Q9H8V3 914 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 NUDT5Q9UKK9 219 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 PATJQ8NI35 1801 aa18.87■□□□□ 0.61
PDLIM2-206ENST00000409141 SLC9A3R1O14745 358 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 SCAMP3O14828 347 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 AMPD2Q01433 879 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 NR1H3Q13133 447 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 FZD5Q13467 585 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 PON2Q15165 354 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 C10orf120Q5SQS8 335 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 TADA2BQ86TJ2 420 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 ZNF687Q8N1G0 1237 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 SIX6OS1Q8N1H7 587 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 KIAA1958Q8N8K9 716 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 SLC35F5Q8WV83 523 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 KCTD13Q8WZ19 329 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 ULBP1Q9BZM6 244 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 LMAN1LQ9HAT1 526 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 CLIC5Q9NZA1 410 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 SH3BP1Q9Y3L3 701 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 COL4A2P08572 1712 aa18.86■□□□□ 0.61
PDLIM2-206ENST00000409141 E2F8A0AVK6 867 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 H0Y858 1186 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 THAP12O43422 761 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 MED7O43513 233 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 NFATC1O95644 943 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 IRF1P10914 325 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 CDK11BP21127 795 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 GNA15P30679 374 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 MAGEA9P43362 315 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 RPS9P46781 194 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 RGS7P49802 495 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 YWHAGP61981 247 aaKnown RBP eCLIP18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 ADIGQ0VDE8 80 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 KCNMA1Q12791 1236 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 KLHL40Q2TBA0 621 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 ANO6Q4KMQ2 910 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 PM20D1Q6GTS8 502 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 PMF1Q6P1K2 205 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 ADGRG2Q8IZP9 1017 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 ANKRD20A12PQ8NF67 263 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 SHC3Q92529 594 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 CDK5RAP1Q96SZ6 601 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 IRF2BPLQ9H1B7 796 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 DNMT3LQ9UJW3 386 aa18.85■□□□□ 0.61
PDLIM2-206ENST00000409141 BECN2A8MW95 431 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 LCP1P13796 627 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 PTMSP20962 102 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 GJA4P35212 333 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 KLHDC10Q6PID8 442 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 ZNF276Q8N554 614 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 AOPEPQ8N6M6 819 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 ZNF606Q8WXB4 792 aa18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 NDRG1Q92597 394 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-206ENST00000409141 LSM14BQ9BX40 385 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms