RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 CCDC105Q8IYK2 499 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 ARFGAP1Q8N6T3 406 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 BBOF1Q8ND07 529 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 OR10T2Q8NGX3 314 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 FAM172AQ8WUF8 416 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 NTAN1Q96AB6 310 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 SPATA17Q96L03 361 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 NPY6RQ99463 290 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 LPIN3Q9BQK8 851 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 MAK16Q9BXY0 300 aaKnown RBP10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 ACBD3Q9H3P7 528 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 VIPAS39Q9H9C1 493 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 EPB41L5Q9HCM4 733 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 AAASQ9NRG9 546 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 ABCC13Q9NSE7 274 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 SMARCAL1Q9NZC9 954 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 CACNG4Q9UBN1 327 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 AMACRQ9UHK6 382 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 SSX2IPQ9Y2D8 614 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
SNORD88C-201ENST00000408061 PATJQ8NI35 1801 aa10.77□□□□□ -0.68
SNORD88C-201ENST00000408061 HTTP42858 3142 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 FAM170AA1A519 330 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 C3orf70A6NLC5 250 aaPredicted RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CAPN9O14815 690 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 B4GALT3O60512 393 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 BEST1O76090 585 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 RTN3O95197 1032 aaPredicted RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 ECEL1O95672 775 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 LTFP02788 710 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 RDXP35241 583 aaKnown RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 PPM1AP35813 382 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 TUFMP49411 452 aaKnown RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 ARSEP51690 589 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 GUCY2DQ02846 1103 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CREMQ03060 361 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CAV1Q03135 178 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 GPS2Q13227 327 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 TCTN1Q2MV58 587 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 ARL13BQ3SXY8 428 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 BEND6Q5SZJ8 279 aaPredicted RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 DUPD1Q68J44 220 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 MFSD7Q6UXD7 560 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CEP128Q6ZU80 1094 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 SND1Q7KZF4 910 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 BZW1Q7L1Q6 419 aaKnown RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 UBE2Q1Q7Z7E8 422 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 LRRTM3Q86VH5 581 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 MON1AQ86VX9 555 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CPNE8Q86YQ8 564 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 RNF168Q8IYW5 571 aaPredicted RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 NUP93Q8N1F7 819 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CCDC89Q8N998 374 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 HASPINQ8TF76 798 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 PIK3R5Q8WYR1 880 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CAVIN3Q969G5 261 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 FAM149B1Q96BN6 582 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 IGSF21Q96ID5 467 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CFAP57Q96MR6 1250 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 ZNF558Q96NG5 402 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 ZNF670Q9BS34 389 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 GPR62Q9BZJ7 368 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 ULBP1Q9BZM6 244 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 DCLK3Q9C098 648 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CWH43Q9H720 699 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 NGRNQ9NPE2 291 aaKnown RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 CHST7Q9NS84 486 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 MARCH5Q9NX47 278 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 IL37Q9NZH6 218 aa10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.69
SNORD88C-201ENST00000408061 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 APOC4-APOC2K7ER74 178 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TNFRSF10BO14763 440 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 APOC2P02655 101 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 FGBP02675 491 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 ITGAVP06756 1048 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 ITIH2P19823 946 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TGM2P21980 687 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 IL1R2P27930 398 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 STIP1P31948 543 aaKnown RBP10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 HTR7P34969 479 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 GRIK1P39086 918 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 PTGIRP43119 386 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 HCAR3P49019 387 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 NR2C2P49116 596 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 HDAC4P56524 1084 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 WDR5P61964 334 aaKnown RBP10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 ATP11AP98196 1134 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TAF5Q15542 800 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 DPYSL2Q16555 572 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 ATP13A4Q4VNC1 1196 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 SLC39A12Q504Y0 691 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 SPDYCQ5MJ68 293 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 TPGS2Q68CL5 300 aa10.76□□□□□ -0.69
SNORD88C-201ENST00000408061 SLC8B1Q6J4K2 584 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms